Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rom1P32958 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rom1P32958 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Rom1P32958 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rom1P32958 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rom1P32958 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rom1P32958 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rom1P32958 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rom1P32958 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Rom1P32958 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Rom1P32958 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Rom1P32958 AC117245.4-201ENSMUST00000217388 1646 ntBASIC16.84■□□□□ 0.29
Rom1P32958 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rom1P32958 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rom1P32958 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC16.84■□□□□ 0.29
Rom1P32958 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Rom1P32958 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Rom1P32958 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rom1P32958 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rom1P32958 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.83■□□□□ 0.28
Rom1P32958 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC16.83■□□□□ 0.28
Rom1P32958 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
Rom1P32958 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rom1P32958 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.82■□□□□ 0.28
Rom1P32958 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rom1P32958 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rom1P32958 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Rom1P32958 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rom1P32958 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rom1P32958 Terc-201ENSMUST00000082862 423 ntBASIC16.82■□□□□ 0.28
Rom1P32958 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rom1P32958 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rom1P32958 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rom1P32958 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rom1P32958 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC16.82■□□□□ 0.28
Rom1P32958 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rom1P32958 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rom1P32958 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rom1P32958 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC16.81■□□□□ 0.28
Rom1P32958 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC16.81■□□□□ 0.28
Rom1P32958 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rom1P32958 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rom1P32958 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rom1P32958 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rom1P32958 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Rom1P32958 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rom1P32958 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rom1P32958 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rom1P32958 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Rom1P32958 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Rom1P32958 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC16.8■□□□□ 0.28
Rom1P32958 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC16.8■□□□□ 0.28
Rom1P32958 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rom1P32958 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rom1P32958 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rom1P32958 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rom1P32958 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rom1P32958 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Rom1P32958 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rom1P32958 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
Rom1P32958 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rom1P32958 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rom1P32958 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rom1P32958 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rom1P32958 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rom1P32958 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rom1P32958 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rom1P32958 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
Rom1P32958 Gm43403-201ENSMUST00000198011 1786 ntBASIC16.77■□□□□ 0.28
Rom1P32958 Gm12818-201ENSMUST00000117562 1349 ntBASIC16.77■□□□□ 0.28
Rom1P32958 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.77■□□□□ 0.28
Rom1P32958 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rom1P32958 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rom1P32958 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Rom1P32958 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Rom1P32958 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rom1P32958 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
Rom1P32958 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rom1P32958 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rom1P32958 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rom1P32958 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC16.76■□□□□ 0.27
Rom1P32958 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rom1P32958 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rom1P32958 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rom1P32958 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Rom1P32958 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Rom1P32958 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Rom1P32958 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC16.75■□□□□ 0.27
Rom1P32958 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rom1P32958 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC16.75■□□□□ 0.27
Rom1P32958 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rom1P32958 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rom1P32958 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC16.74■□□□□ 0.27
Rom1P32958 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rom1P32958 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rom1P32958 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rom1P32958 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rom1P32958 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rom1P32958 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Rom1P32958 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 135.7 ms