Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TP20293 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TP20293 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
TP20293 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TP20293 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
TP20293 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TP20293 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TP20293 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TP20293 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TP20293 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TP20293 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TP20293 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.9■□□□□ 0.78
TP20293 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TP20293 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TP20293 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TP20293 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
TP20293 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TP20293 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TP20293 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TP20293 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TP20293 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
TP20293 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
TP20293 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
TP20293 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TP20293 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TP20293 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TP20293 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TP20293 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TP20293 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
TP20293 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TP20293 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TP20293 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TP20293 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
TP20293 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TP20293 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.88■□□□□ 0.77
TP20293 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.88■□□□□ 0.77
TP20293 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.88■□□□□ 0.77
TP20293 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.88■□□□□ 0.77
TP20293 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TP20293 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
TP20293 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TP20293 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TP20293 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
TP20293 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TP20293 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
TP20293 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TP20293 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TP20293 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
TP20293 Gm5921-201ENSMUST00000075898 882 ntBASIC19.87■□□□□ 0.77
TP20293 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TP20293 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TP20293 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TP20293 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
TP20293 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TP20293 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TP20293 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.86■□□□□ 0.77
TP20293 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.86■□□□□ 0.77
TP20293 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TP20293 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TP20293 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
TP20293 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TP20293 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TP20293 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TP20293 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
TP20293 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
TP20293 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TP20293 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TP20293 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TP20293 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TP20293 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
TP20293 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.84■□□□□ 0.77
TP20293 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
TP20293 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TP20293 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TP20293 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TP20293 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TP20293 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TP20293 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.83■□□□□ 0.77
TP20293 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TP20293 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.83■□□□□ 0.77
TP20293 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.76
TP20293 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TP20293 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
TP20293 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
TP20293 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TP20293 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.82■□□□□ 0.76
TP20293 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.82■□□□□ 0.76
TP20293 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TP20293 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TP20293 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TP20293 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.81■□□□□ 0.76
TP20293 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
TP20293 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.81■□□□□ 0.76
TP20293 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TP20293 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
TP20293 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TP20293 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TP20293 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TP20293 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.8■□□□□ 0.76
TP20293 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 971.9 ms