Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.92■□□□□ 0.62
Hdac3O88895 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hdac3O88895 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Hdac3O88895 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.92■□□□□ 0.62
Hdac3O88895 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hdac3O88895 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hdac3O88895 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Hdac3O88895 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hdac3O88895 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hdac3O88895 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hdac3O88895 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Hdac3O88895 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hdac3O88895 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
Hdac3O88895 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
Hdac3O88895 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Hdac3O88895 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Hdac3O88895 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.9■□□□□ 0.62
Hdac3O88895 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.9■□□□□ 0.62
Hdac3O88895 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.9■□□□□ 0.62
Hdac3O88895 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hdac3O88895 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hdac3O88895 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Hdac3O88895 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hdac3O88895 Gm7332-201ENSMUST00000118351 454 ntBASIC18.89■□□□□ 0.61
Hdac3O88895 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hdac3O88895 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hdac3O88895 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Hdac3O88895 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Hdac3O88895 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Hdac3O88895 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Hdac3O88895 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hdac3O88895 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
Hdac3O88895 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hdac3O88895 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hdac3O88895 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Hdac3O88895 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hdac3O88895 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hdac3O88895 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Hdac3O88895 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Hdac3O88895 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18.87■□□□□ 0.61
Hdac3O88895 Gm27502-201ENSMUST00000183495 199 ntBASIC18.87■□□□□ 0.61
Hdac3O88895 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hdac3O88895 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hdac3O88895 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hdac3O88895 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hdac3O88895 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Hdac3O88895 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hdac3O88895 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hdac3O88895 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hdac3O88895 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hdac3O88895 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Hdac3O88895 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Hdac3O88895 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Hdac3O88895 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hdac3O88895 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hdac3O88895 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Hdac3O88895 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hdac3O88895 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hdac3O88895 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hdac3O88895 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.85■□□□□ 0.61
Hdac3O88895 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hdac3O88895 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.85■□□□□ 0.61
Hdac3O88895 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hdac3O88895 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.85■□□□□ 0.61
Hdac3O88895 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hdac3O88895 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Hdac3O88895 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.85■□□□□ 0.61
Hdac3O88895 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Hdac3O88895 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hdac3O88895 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hdac3O88895 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hdac3O88895 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hdac3O88895 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hdac3O88895 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hdac3O88895 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hdac3O88895 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.84■□□□□ 0.61
Hdac3O88895 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.84■□□□□ 0.61
Hdac3O88895 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Hdac3O88895 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hdac3O88895 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hdac3O88895 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Hdac3O88895 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Hdac3O88895 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hdac3O88895 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Hdac3O88895 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
Hdac3O88895 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hdac3O88895 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hdac3O88895 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Hdac3O88895 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hdac3O88895 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Hdac3O88895 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.82■□□□□ 0.6
Hdac3O88895 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hdac3O88895 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hdac3O88895 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hdac3O88895 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hdac3O88895 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hdac3O88895 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hdac3O88895 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hdac3O88895 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Hdac3O88895 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms