Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.65■□□□□ 0.9
ClppO88696 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ClppO88696 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
ClppO88696 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.65■□□□□ 0.9
ClppO88696 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
ClppO88696 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ClppO88696 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
ClppO88696 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.64■□□□□ 0.89
ClppO88696 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.64■□□□□ 0.89
ClppO88696 Gm9959-201ENSMUST00000068277 390 ntBASIC20.64■□□□□ 0.89
ClppO88696 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ClppO88696 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ClppO88696 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ClppO88696 Gm14117-201ENSMUST00000122417 843 ntBASIC20.63■□□□□ 0.89
ClppO88696 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ClppO88696 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ClppO88696 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ClppO88696 Iqck-206ENSMUST00000208658 2891 ntBASIC20.63■□□□□ 0.89
ClppO88696 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ClppO88696 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
ClppO88696 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
ClppO88696 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ClppO88696 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ClppO88696 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ClppO88696 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ClppO88696 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ClppO88696 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.61■□□□□ 0.89
ClppO88696 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ClppO88696 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ClppO88696 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
ClppO88696 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
ClppO88696 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ClppO88696 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
ClppO88696 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ClppO88696 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.59■□□□□ 0.89
ClppO88696 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
ClppO88696 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
ClppO88696 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ClppO88696 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ClppO88696 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ClppO88696 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.58■□□□□ 0.89
ClppO88696 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
ClppO88696 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ClppO88696 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ClppO88696 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
ClppO88696 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ClppO88696 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.57■□□□□ 0.88
ClppO88696 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.57■□□□□ 0.88
ClppO88696 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ClppO88696 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ClppO88696 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ClppO88696 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ClppO88696 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ClppO88696 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.56■□□□□ 0.88
ClppO88696 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.56■□□□□ 0.88
ClppO88696 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ClppO88696 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ClppO88696 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ClppO88696 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ClppO88696 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ClppO88696 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.55■□□□□ 0.88
ClppO88696 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ClppO88696 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ClppO88696 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.55■□□□□ 0.88
ClppO88696 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
ClppO88696 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ClppO88696 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ClppO88696 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ClppO88696 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
ClppO88696 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
ClppO88696 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ClppO88696 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
ClppO88696 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ClppO88696 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
ClppO88696 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
ClppO88696 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
ClppO88696 Etf1-202ENSMUST00000180351 108 ntBASIC20.53■□□□□ 0.88
ClppO88696 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.53■□□□□ 0.88
ClppO88696 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ClppO88696 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.53■□□□□ 0.88
ClppO88696 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ClppO88696 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.53■□□□□ 0.88
ClppO88696 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.52■□□□□ 0.88
ClppO88696 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ClppO88696 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ClppO88696 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ClppO88696 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.52■□□□□ 0.88
ClppO88696 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ClppO88696 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ClppO88696 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
ClppO88696 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
ClppO88696 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
ClppO88696 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
ClppO88696 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
ClppO88696 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.51■□□□□ 0.87
ClppO88696 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
ClppO88696 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ClppO88696 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.51■□□□□ 0.87
ClppO88696 Gm15039-201ENSMUST00000118914 875 ntBASIC20.51■□□□□ 0.87
ClppO88696 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 8.3 ms