Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Pdlim1O70400 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Pdlim1O70400 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pdlim1O70400 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Pdlim1O70400 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pdlim1O70400 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pdlim1O70400 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pdlim1O70400 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.1■□□□□ 0.97
Pdlim1O70400 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pdlim1O70400 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.1■□□□□ 0.97
Pdlim1O70400 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pdlim1O70400 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pdlim1O70400 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pdlim1O70400 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pdlim1O70400 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pdlim1O70400 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Pdlim1O70400 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pdlim1O70400 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Pdlim1O70400 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pdlim1O70400 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pdlim1O70400 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pdlim1O70400 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pdlim1O70400 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Pdlim1O70400 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.08■□□□□ 0.97
Pdlim1O70400 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pdlim1O70400 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pdlim1O70400 Gm5812-201ENSMUST00000061073 957 ntBASIC21.08■□□□□ 0.97
Pdlim1O70400 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pdlim1O70400 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.07■□□□□ 0.96
Pdlim1O70400 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pdlim1O70400 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Pdlim1O70400 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Pdlim1O70400 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Pdlim1O70400 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Pdlim1O70400 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.07■□□□□ 0.96
Pdlim1O70400 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.07■□□□□ 0.96
Pdlim1O70400 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Pdlim1O70400 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pdlim1O70400 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Pdlim1O70400 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pdlim1O70400 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.06■□□□□ 0.96
Pdlim1O70400 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Pdlim1O70400 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pdlim1O70400 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.05■□□□□ 0.96
Pdlim1O70400 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Pdlim1O70400 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pdlim1O70400 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pdlim1O70400 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.05■□□□□ 0.96
Pdlim1O70400 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.05■□□□□ 0.96
Pdlim1O70400 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pdlim1O70400 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Pdlim1O70400 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pdlim1O70400 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pdlim1O70400 Gm10232-201ENSMUST00000089221 720 ntBASIC21.04■□□□□ 0.96
Pdlim1O70400 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Pdlim1O70400 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pdlim1O70400 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Pdlim1O70400 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pdlim1O70400 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pdlim1O70400 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pdlim1O70400 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.03■□□□□ 0.96
Pdlim1O70400 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pdlim1O70400 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pdlim1O70400 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Pdlim1O70400 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.02■□□□□ 0.96
Pdlim1O70400 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Pdlim1O70400 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Pdlim1O70400 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Pdlim1O70400 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.01■□□□□ 0.95
Pdlim1O70400 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pdlim1O70400 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Pdlim1O70400 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.01■□□□□ 0.95
Pdlim1O70400 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pdlim1O70400 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Pdlim1O70400 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pdlim1O70400 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pdlim1O70400 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
Pdlim1O70400 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pdlim1O70400 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pdlim1O70400 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pdlim1O70400 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21■□□□□ 0.95
Pdlim1O70400 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pdlim1O70400 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pdlim1O70400 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pdlim1O70400 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pdlim1O70400 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.99■□□□□ 0.95
Pdlim1O70400 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.98■□□□□ 0.95
Pdlim1O70400 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Pdlim1O70400 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.98■□□□□ 0.95
Pdlim1O70400 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.98■□□□□ 0.95
Pdlim1O70400 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Pdlim1O70400 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pdlim1O70400 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pdlim1O70400 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pdlim1O70400 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pdlim1O70400 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Pdlim1O70400 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Pdlim1O70400 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.97■□□□□ 0.95
Pdlim1O70400 Gm15546-201ENSMUST00000122095 826 ntBASIC20.97■□□□□ 0.95
Pdlim1O70400 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms