Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cacna1bO55017 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cacna1bO55017 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cacna1bO55017 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cacna1bO55017 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cacna1bO55017 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.75■□□□□ 0.91
Cacna1bO55017 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.75■□□□□ 0.91
Cacna1bO55017 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Cacna1bO55017 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Cacna1bO55017 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Cacna1bO55017 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cacna1bO55017 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cacna1bO55017 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cacna1bO55017 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.73■□□□□ 0.91
Cacna1bO55017 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cacna1bO55017 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cacna1bO55017 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cacna1bO55017 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cacna1bO55017 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Cacna1bO55017 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Cacna1bO55017 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
Cacna1bO55017 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cacna1bO55017 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cacna1bO55017 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Cacna1bO55017 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cacna1bO55017 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cacna1bO55017 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cacna1bO55017 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cacna1bO55017 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Cacna1bO55017 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.71■□□□□ 0.91
Cacna1bO55017 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cacna1bO55017 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cacna1bO55017 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cacna1bO55017 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Cacna1bO55017 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.7■□□□□ 0.9
Cacna1bO55017 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cacna1bO55017 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cacna1bO55017 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Cacna1bO55017 Gm29257-201ENSMUST00000186115 639 ntBASIC20.7■□□□□ 0.9
Cacna1bO55017 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cacna1bO55017 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cacna1bO55017 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cacna1bO55017 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.69■□□□□ 0.9
Cacna1bO55017 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cacna1bO55017 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
Cacna1bO55017 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.69■□□□□ 0.9
Cacna1bO55017 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.69■□□□□ 0.9
Cacna1bO55017 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cacna1bO55017 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Cacna1bO55017 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Cacna1bO55017 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cacna1bO55017 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cacna1bO55017 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cacna1bO55017 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.68■□□□□ 0.9
Cacna1bO55017 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cacna1bO55017 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cacna1bO55017 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cacna1bO55017 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cacna1bO55017 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.67■□□□□ 0.9
Cacna1bO55017 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cacna1bO55017 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Cacna1bO55017 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Cacna1bO55017 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cacna1bO55017 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacna1bO55017 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cacna1bO55017 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacna1bO55017 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Cacna1bO55017 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Cacna1bO55017 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cacna1bO55017 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacna1bO55017 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacna1bO55017 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cacna1bO55017 Gm5874-201ENSMUST00000096101 508 ntBASIC20.64■□□□□ 0.89
Cacna1bO55017 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cacna1bO55017 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.64■□□□□ 0.89
Cacna1bO55017 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cacna1bO55017 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cacna1bO55017 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cacna1bO55017 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.64■□□□□ 0.89
Cacna1bO55017 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cacna1bO55017 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.64■□□□□ 0.89
Cacna1bO55017 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cacna1bO55017 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.63■□□□□ 0.89
Cacna1bO55017 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cacna1bO55017 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cacna1bO55017 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.62■□□□□ 0.89
Cacna1bO55017 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cacna1bO55017 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cacna1bO55017 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cacna1bO55017 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cacna1bO55017 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.61■□□□□ 0.89
Cacna1bO55017 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cacna1bO55017 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Cacna1bO55017 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cacna1bO55017 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cacna1bO55017 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cacna1bO55017 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.6■□□□□ 0.89
Cacna1bO55017 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.6■□□□□ 0.89
Cacna1bO55017 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cacna1bO55017 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms