Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Gm8493-201ENSMUST00000196881 489 ntBASIC20.7■□□□□ 0.9
Abca4O35600 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Abca4O35600 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Abca4O35600 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Abca4O35600 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Abca4O35600 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Abca4O35600 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Abca4O35600 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Abca4O35600 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Abca4O35600 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.68■□□□□ 0.9
Abca4O35600 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Abca4O35600 Gm43173-201ENSMUST00000202246 593 ntBASIC20.68■□□□□ 0.9
Abca4O35600 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Abca4O35600 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Abca4O35600 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Abca4O35600 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Abca4O35600 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Abca4O35600 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.67■□□□□ 0.9
Abca4O35600 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Abca4O35600 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Abca4O35600 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.67■□□□□ 0.9
Abca4O35600 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Abca4O35600 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Abca4O35600 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.66■□□□□ 0.9
Abca4O35600 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Abca4O35600 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Abca4O35600 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.66■□□□□ 0.9
Abca4O35600 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Abca4O35600 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Abca4O35600 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
Abca4O35600 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.66■□□□□ 0.9
Abca4O35600 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.65■□□□□ 0.9
Abca4O35600 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Abca4O35600 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Abca4O35600 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
Abca4O35600 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Abca4O35600 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Abca4O35600 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Abca4O35600 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.65■□□□□ 0.9
Abca4O35600 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Abca4O35600 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Abca4O35600 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Abca4O35600 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Abca4O35600 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Abca4O35600 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Abca4O35600 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.62■□□□□ 0.89
Abca4O35600 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Abca4O35600 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Abca4O35600 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Abca4O35600 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.62■□□□□ 0.89
Abca4O35600 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Abca4O35600 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Abca4O35600 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Abca4O35600 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Abca4O35600 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Abca4O35600 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Abca4O35600 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
Abca4O35600 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Abca4O35600 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Abca4O35600 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Abca4O35600 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Abca4O35600 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.6■□□□□ 0.89
Abca4O35600 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Abca4O35600 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Abca4O35600 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Abca4O35600 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Abca4O35600 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.6■□□□□ 0.89
Abca4O35600 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Abca4O35600 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Abca4O35600 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Abca4O35600 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Abca4O35600 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Abca4O35600 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Abca4O35600 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Abca4O35600 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Abca4O35600 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.59■□□□□ 0.89
Abca4O35600 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Abca4O35600 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Abca4O35600 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Abca4O35600 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Abca4O35600 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Abca4O35600 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.57■□□□□ 0.88
Abca4O35600 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
Abca4O35600 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Abca4O35600 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.56■□□□□ 0.88
Abca4O35600 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.56■□□□□ 0.88
Abca4O35600 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Abca4O35600 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.56■□□□□ 0.88
Abca4O35600 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.55■□□□□ 0.88
Abca4O35600 Gm22325-201ENSMUST00000158904 308 ntBASIC20.55■□□□□ 0.88
Abca4O35600 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.55■□□□□ 0.88
Abca4O35600 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Abca4O35600 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Abca4O35600 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.54■□□□□ 0.88
Abca4O35600 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.54■□□□□ 0.88
Abca4O35600 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.54■□□□□ 0.88
Abca4O35600 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.54■□□□□ 0.88
Abca4O35600 Nespas-201ENSMUST00000143738 1083 ntBASIC20.54■□□□□ 0.88
Abca4O35600 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Abca4O35600 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms