Protein–RNA interactions for Protein: O35493

Clk4, Dual specificity protein kinase CLK4, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4O35493 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Clk4O35493 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clk4O35493 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clk4O35493 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clk4O35493 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clk4O35493 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.35■□□□□ 0.85
Clk4O35493 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Clk4O35493 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clk4O35493 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clk4O35493 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clk4O35493 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clk4O35493 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.34■□□□□ 0.85
Clk4O35493 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Clk4O35493 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Clk4O35493 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Clk4O35493 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Clk4O35493 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Clk4O35493 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Clk4O35493 Gm43566-201ENSMUST00000196851 808 ntBASIC20.34■□□□□ 0.85
Clk4O35493 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Clk4O35493 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Clk4O35493 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Clk4O35493 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Clk4O35493 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Clk4O35493 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Clk4O35493 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Clk4O35493 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Clk4O35493 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Clk4O35493 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clk4O35493 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.32■□□□□ 0.84
Clk4O35493 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clk4O35493 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Clk4O35493 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clk4O35493 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clk4O35493 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clk4O35493 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clk4O35493 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clk4O35493 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clk4O35493 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clk4O35493 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clk4O35493 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clk4O35493 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Clk4O35493 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clk4O35493 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clk4O35493 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.3■□□□□ 0.84
Clk4O35493 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Clk4O35493 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Clk4O35493 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Clk4O35493 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clk4O35493 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clk4O35493 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clk4O35493 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Clk4O35493 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Clk4O35493 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Clk4O35493 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Clk4O35493 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
Clk4O35493 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clk4O35493 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clk4O35493 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Clk4O35493 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Clk4O35493 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clk4O35493 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clk4O35493 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Clk4O35493 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clk4O35493 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.27■□□□□ 0.84
Clk4O35493 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Clk4O35493 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clk4O35493 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Clk4O35493 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clk4O35493 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clk4O35493 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clk4O35493 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clk4O35493 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Clk4O35493 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clk4O35493 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clk4O35493 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Clk4O35493 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.24■□□□□ 0.83
Clk4O35493 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clk4O35493 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Clk4O35493 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clk4O35493 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Clk4O35493 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clk4O35493 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clk4O35493 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Clk4O35493 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clk4O35493 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clk4O35493 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Clk4O35493 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clk4O35493 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.23■□□□□ 0.83
Clk4O35493 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.23■□□□□ 0.83
Clk4O35493 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Clk4O35493 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clk4O35493 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Clk4O35493 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clk4O35493 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clk4O35493 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clk4O35493 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
Clk4O35493 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clk4O35493 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clk4O35493 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 1229.9 ms