Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.68■■□□□ 1.06
Trove2O08848 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Trove2O08848 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Trove2O08848 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trove2O08848 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Trove2O08848 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trove2O08848 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
Trove2O08848 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trove2O08848 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trove2O08848 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.66■■□□□ 1.06
Trove2O08848 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trove2O08848 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trove2O08848 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trove2O08848 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.66■■□□□ 1.06
Trove2O08848 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
Trove2O08848 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trove2O08848 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.65■■□□□ 1.06
Trove2O08848 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Trove2O08848 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.65■■□□□ 1.06
Trove2O08848 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.65■■□□□ 1.06
Trove2O08848 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Trove2O08848 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trove2O08848 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.64■■□□□ 1.06
Trove2O08848 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
Trove2O08848 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Trove2O08848 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Trove2O08848 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.64■■□□□ 1.05
Trove2O08848 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.64■■□□□ 1.05
Trove2O08848 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Trove2O08848 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Trove2O08848 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Trove2O08848 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Trove2O08848 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.05
Trove2O08848 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trove2O08848 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trove2O08848 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trove2O08848 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.63■■□□□ 1.05
Trove2O08848 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trove2O08848 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trove2O08848 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trove2O08848 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trove2O08848 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trove2O08848 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trove2O08848 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trove2O08848 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trove2O08848 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Trove2O08848 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.62■■□□□ 1.05
Trove2O08848 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.62■■□□□ 1.05
Trove2O08848 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Trove2O08848 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trove2O08848 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trove2O08848 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trove2O08848 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trove2O08848 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trove2O08848 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trove2O08848 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trove2O08848 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Trove2O08848 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Trove2O08848 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Trove2O08848 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trove2O08848 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Trove2O08848 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trove2O08848 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trove2O08848 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trove2O08848 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trove2O08848 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Trove2O08848 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.6■■□□□ 1.05
Trove2O08848 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trove2O08848 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trove2O08848 Scarna2-201ENSMUST00000157560 414 ntBASIC21.59■■□□□ 1.05
Trove2O08848 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.59■■□□□ 1.05
Trove2O08848 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Trove2O08848 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Trove2O08848 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Trove2O08848 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trove2O08848 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trove2O08848 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trove2O08848 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.58■■□□□ 1.05
Trove2O08848 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Trove2O08848 Gm22567-201ENSMUST00000175542 342 ntBASIC21.58■■□□□ 1.05
Trove2O08848 Gm9806-201ENSMUST00000051080 552 ntBASIC21.58■■□□□ 1.05
Trove2O08848 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.58■■□□□ 1.04
Trove2O08848 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Trove2O08848 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trove2O08848 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trove2O08848 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trove2O08848 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trove2O08848 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trove2O08848 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trove2O08848 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.56■■□□□ 1.04
Trove2O08848 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trove2O08848 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Trove2O08848 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trove2O08848 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trove2O08848 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trove2O08848 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
Trove2O08848 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trove2O08848 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trove2O08848 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Trove2O08848 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms