Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh1F7BJK1 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh1F7BJK1 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.16■□□□□ 0.66
Pcdh1F7BJK1 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh1F7BJK1 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh1F7BJK1 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh1F7BJK1 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdh1F7BJK1 Gm44428-201ENSMUST00000204474 874 ntBASIC19.14■□□□□ 0.65
Pcdh1F7BJK1 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdh1F7BJK1 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.14■□□□□ 0.65
Pcdh1F7BJK1 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdh1F7BJK1 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Pcdh1F7BJK1 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdh1F7BJK1 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdh1F7BJK1 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh1F7BJK1 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.13■□□□□ 0.65
Pcdh1F7BJK1 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh1F7BJK1 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Pcdh1F7BJK1 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh1F7BJK1 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh1F7BJK1 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh1F7BJK1 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh1F7BJK1 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh1F7BJK1 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh1F7BJK1 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh1F7BJK1 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh1F7BJK1 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh1F7BJK1 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh1F7BJK1 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Pcdh1F7BJK1 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh1F7BJK1 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh1F7BJK1 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Pcdh1F7BJK1 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.1■□□□□ 0.65
Pcdh1F7BJK1 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdh1F7BJK1 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdh1F7BJK1 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdh1F7BJK1 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdh1F7BJK1 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdh1F7BJK1 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.09■□□□□ 0.65
Pcdh1F7BJK1 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdh1F7BJK1 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdh1F7BJK1 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdh1F7BJK1 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdh1F7BJK1 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Pcdh1F7BJK1 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdh1F7BJK1 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdh1F7BJK1 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
Pcdh1F7BJK1 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdh1F7BJK1 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.08■□□□□ 0.64
Pcdh1F7BJK1 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.08■□□□□ 0.64
Pcdh1F7BJK1 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdh1F7BJK1 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Pcdh1F7BJK1 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdh1F7BJK1 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh1F7BJK1 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh1F7BJK1 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Pcdh1F7BJK1 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh1F7BJK1 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.07■□□□□ 0.64
Pcdh1F7BJK1 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh1F7BJK1 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh1F7BJK1 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh1F7BJK1 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh1F7BJK1 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
Pcdh1F7BJK1 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.06■□□□□ 0.64
Pcdh1F7BJK1 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.06■□□□□ 0.64
Pcdh1F7BJK1 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh1F7BJK1 Gm6311-201ENSMUST00000073790 878 ntBASIC19.06■□□□□ 0.64
Pcdh1F7BJK1 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh1F7BJK1 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh1F7BJK1 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh1F7BJK1 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh1F7BJK1 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.05■□□□□ 0.64
Pcdh1F7BJK1 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Pcdh1F7BJK1 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.05■□□□□ 0.64
Pcdh1F7BJK1 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
Pcdh1F7BJK1 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh1F7BJK1 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh1F7BJK1 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh1F7BJK1 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh1F7BJK1 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh1F7BJK1 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh1F7BJK1 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh1F7BJK1 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh1F7BJK1 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh1F7BJK1 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Pcdh1F7BJK1 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh1F7BJK1 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Pcdh1F7BJK1 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh1F7BJK1 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.03■□□□□ 0.64
Pcdh1F7BJK1 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh1F7BJK1 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.03■□□□□ 0.64
Pcdh1F7BJK1 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh1F7BJK1 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.03■□□□□ 0.64
Pcdh1F7BJK1 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh1F7BJK1 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh1F7BJK1 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.02■□□□□ 0.64
Pcdh1F7BJK1 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdh1F7BJK1 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.02■□□□□ 0.64
Pcdh1F7BJK1 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdh1F7BJK1 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 106.5 ms