Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ccdc188F6WEU2 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ccdc188F6WEU2 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ccdc188F6WEU2 Zxda-201ENSMUST00000117281 2621 ntBASIC22.29■■□□□ 1.16
Ccdc188F6WEU2 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ccdc188F6WEU2 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ccdc188F6WEU2 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC22.28■■□□□ 1.16
Ccdc188F6WEU2 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Ccdc188F6WEU2 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ccdc188F6WEU2 Gm10620-201ENSMUST00000098379 1332 ntBASIC22.28■■□□□ 1.16
Ccdc188F6WEU2 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Ccdc188F6WEU2 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ccdc188F6WEU2 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC22.27■■□□□ 1.16
Ccdc188F6WEU2 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC22.27■■□□□ 1.16
Ccdc188F6WEU2 Nsd1-206ENSMUST00000224918 1001 ntBASIC22.27■■□□□ 1.16
Ccdc188F6WEU2 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Ccdc188F6WEU2 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ccdc188F6WEU2 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ccdc188F6WEU2 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ccdc188F6WEU2 Spcs1-204ENSMUST00000226782 949 ntBASIC22.26■■□□□ 1.15
Ccdc188F6WEU2 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Ccdc188F6WEU2 Fezf2-202ENSMUST00000224023 1917 ntBASIC22.25■■□□□ 1.15
Ccdc188F6WEU2 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ccdc188F6WEU2 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Ccdc188F6WEU2 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ccdc188F6WEU2 Gm42642-201ENSMUST00000200683 355 ntBASIC22.25■■□□□ 1.15
Ccdc188F6WEU2 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Ccdc188F6WEU2 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ccdc188F6WEU2 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ccdc188F6WEU2 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ccdc188F6WEU2 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC22.24■■□□□ 1.15
Ccdc188F6WEU2 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ccdc188F6WEU2 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ccdc188F6WEU2 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ccdc188F6WEU2 Gm10493-201ENSMUST00000097270 612 ntBASIC22.23■■□□□ 1.15
Ccdc188F6WEU2 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Ccdc188F6WEU2 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Ccdc188F6WEU2 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC22.22■■□□□ 1.15
Ccdc188F6WEU2 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Ccdc188F6WEU2 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
Ccdc188F6WEU2 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22.22■■□□□ 1.15
Ccdc188F6WEU2 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ccdc188F6WEU2 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ccdc188F6WEU2 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
Ccdc188F6WEU2 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Ccdc188F6WEU2 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC22.21■■□□□ 1.15
Ccdc188F6WEU2 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Ccdc188F6WEU2 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ccdc188F6WEU2 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ccdc188F6WEU2 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC22.2■■□□□ 1.14
Ccdc188F6WEU2 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Ccdc188F6WEU2 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ccdc188F6WEU2 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ccdc188F6WEU2 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC22.2■■□□□ 1.14
Ccdc188F6WEU2 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Ccdc188F6WEU2 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ccdc188F6WEU2 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Ccdc188F6WEU2 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC22.19■■□□□ 1.14
Ccdc188F6WEU2 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC22.19■■□□□ 1.14
Ccdc188F6WEU2 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC22.19■■□□□ 1.14
Ccdc188F6WEU2 Gm43173-201ENSMUST00000202246 593 ntBASIC22.19■■□□□ 1.14
Ccdc188F6WEU2 Wdr70-203ENSMUST00000227371 1130 ntBASIC22.19■■□□□ 1.14
Ccdc188F6WEU2 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Ccdc188F6WEU2 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ccdc188F6WEU2 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ccdc188F6WEU2 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ccdc188F6WEU2 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Ccdc188F6WEU2 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
Ccdc188F6WEU2 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ccdc188F6WEU2 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
Ccdc188F6WEU2 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ccdc188F6WEU2 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ccdc188F6WEU2 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ccdc188F6WEU2 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Ccdc188F6WEU2 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Ccdc188F6WEU2 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ccdc188F6WEU2 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Ccdc188F6WEU2 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Ccdc188F6WEU2 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Ccdc188F6WEU2 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ccdc188F6WEU2 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ccdc188F6WEU2 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ccdc188F6WEU2 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ccdc188F6WEU2 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ccdc188F6WEU2 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ccdc188F6WEU2 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC22.15■■□□□ 1.14
Ccdc188F6WEU2 Gm22325-201ENSMUST00000158904 308 ntBASIC22.15■■□□□ 1.14
Ccdc188F6WEU2 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ccdc188F6WEU2 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC22.15■■□□□ 1.14
Ccdc188F6WEU2 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ccdc188F6WEU2 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ccdc188F6WEU2 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ccdc188F6WEU2 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22.14■■□□□ 1.14
Ccdc188F6WEU2 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
Ccdc188F6WEU2 AC099934.2-201ENSMUST00000196389 70 ntBASIC22.14■■□□□ 1.13
Ccdc188F6WEU2 AC156953.1-201ENSMUST00000196953 70 ntBASIC22.14■■□□□ 1.13
Ccdc188F6WEU2 AC157822.2-201ENSMUST00000200291 70 ntBASIC22.14■■□□□ 1.13
Ccdc188F6WEU2 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Ccdc188F6WEU2 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Ccdc188F6WEU2 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 96.8 ms