Protein–RNA interactions for Protein: E9PX29

Sptbn4, Spectrin beta chain, mousemouse

Predictions only

Length 2,561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4E9PX29 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sptbn4E9PX29 Gm42642-201ENSMUST00000200683 355 ntBASIC19.82■□□□□ 0.76
Sptbn4E9PX29 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sptbn4E9PX29 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.81■□□□□ 0.76
Sptbn4E9PX29 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
Sptbn4E9PX29 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sptbn4E9PX29 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sptbn4E9PX29 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sptbn4E9PX29 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sptbn4E9PX29 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Sptbn4E9PX29 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Sptbn4E9PX29 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.8■□□□□ 0.76
Sptbn4E9PX29 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Sptbn4E9PX29 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sptbn4E9PX29 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.8■□□□□ 0.76
Sptbn4E9PX29 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Sptbn4E9PX29 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sptbn4E9PX29 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sptbn4E9PX29 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.79■□□□□ 0.76
Sptbn4E9PX29 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sptbn4E9PX29 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Sptbn4E9PX29 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sptbn4E9PX29 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.78■□□□□ 0.76
Sptbn4E9PX29 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sptbn4E9PX29 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Sptbn4E9PX29 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.77■□□□□ 0.76
Sptbn4E9PX29 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.77■□□□□ 0.76
Sptbn4E9PX29 Gm43173-201ENSMUST00000202246 593 ntBASIC19.77■□□□□ 0.76
Sptbn4E9PX29 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sptbn4E9PX29 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Sptbn4E9PX29 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
Sptbn4E9PX29 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Sptbn4E9PX29 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.76■□□□□ 0.75
Sptbn4E9PX29 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sptbn4E9PX29 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sptbn4E9PX29 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.76■□□□□ 0.75
Sptbn4E9PX29 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sptbn4E9PX29 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sptbn4E9PX29 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sptbn4E9PX29 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Sptbn4E9PX29 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Sptbn4E9PX29 Gm8493-201ENSMUST00000196881 489 ntBASIC19.75■□□□□ 0.75
Sptbn4E9PX29 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Sptbn4E9PX29 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Sptbn4E9PX29 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.75■□□□□ 0.75
Sptbn4E9PX29 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Sptbn4E9PX29 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sptbn4E9PX29 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Sptbn4E9PX29 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.75■□□□□ 0.75
Sptbn4E9PX29 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Sptbn4E9PX29 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sptbn4E9PX29 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sptbn4E9PX29 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Sptbn4E9PX29 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.74■□□□□ 0.75
Sptbn4E9PX29 Zxda-201ENSMUST00000117281 2621 ntBASIC19.74■□□□□ 0.75
Sptbn4E9PX29 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sptbn4E9PX29 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.74■□□□□ 0.75
Sptbn4E9PX29 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Sptbn4E9PX29 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sptbn4E9PX29 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Sptbn4E9PX29 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
Sptbn4E9PX29 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sptbn4E9PX29 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sptbn4E9PX29 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.73■□□□□ 0.75
Sptbn4E9PX29 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Sptbn4E9PX29 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Sptbn4E9PX29 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sptbn4E9PX29 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sptbn4E9PX29 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Sptbn4E9PX29 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sptbn4E9PX29 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sptbn4E9PX29 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.72■□□□□ 0.75
Sptbn4E9PX29 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.71■□□□□ 0.75
Sptbn4E9PX29 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Sptbn4E9PX29 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.71■□□□□ 0.75
Sptbn4E9PX29 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sptbn4E9PX29 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sptbn4E9PX29 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Sptbn4E9PX29 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Sptbn4E9PX29 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Sptbn4E9PX29 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.7■□□□□ 0.74
Sptbn4E9PX29 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sptbn4E9PX29 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.69■□□□□ 0.74
Sptbn4E9PX29 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sptbn4E9PX29 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sptbn4E9PX29 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sptbn4E9PX29 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sptbn4E9PX29 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Sptbn4E9PX29 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Sptbn4E9PX29 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sptbn4E9PX29 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Sptbn4E9PX29 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Sptbn4E9PX29 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.67■□□□□ 0.74
Sptbn4E9PX29 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.67■□□□□ 0.74
Sptbn4E9PX29 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
Sptbn4E9PX29 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.67■□□□□ 0.74
Sptbn4E9PX29 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sptbn4E9PX29 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sptbn4E9PX29 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.67■□□□□ 0.74
Sptbn4E9PX29 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 136.5 ms