Protein–RNA interactions for Protein: D3YV89

Mmp27, Matrix metalloproteinase, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp27D3YV89 Gm4419-202ENSMUST00000226239 1431 ntBASIC17.86■□□□□ 0.45
Mmp27D3YV89 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp27D3YV89 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Mmp27D3YV89 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp27D3YV89 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp27D3YV89 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Mmp27D3YV89 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC17.85■□□□□ 0.45
Mmp27D3YV89 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp27D3YV89 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp27D3YV89 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Mmp27D3YV89 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC17.85■□□□□ 0.45
Mmp27D3YV89 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp27D3YV89 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp27D3YV89 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Mmp27D3YV89 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.85■□□□□ 0.45
Mmp27D3YV89 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mmp27D3YV89 AC153911.1-201ENSMUST00000220378 758 ntBASIC17.84■□□□□ 0.45
Mmp27D3YV89 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mmp27D3YV89 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.84■□□□□ 0.45
Mmp27D3YV89 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mmp27D3YV89 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Mmp27D3YV89 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Mmp27D3YV89 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Mmp27D3YV89 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Mmp27D3YV89 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.83■□□□□ 0.44
Mmp27D3YV89 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Mmp27D3YV89 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.83■□□□□ 0.44
Mmp27D3YV89 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Mmp27D3YV89 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Mmp27D3YV89 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Mmp27D3YV89 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Mmp27D3YV89 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Mmp27D3YV89 Gm9910-201ENSMUST00000195385 1550 ntBASIC17.82■□□□□ 0.44
Mmp27D3YV89 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Mmp27D3YV89 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mmp27D3YV89 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Mmp27D3YV89 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Mmp27D3YV89 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mmp27D3YV89 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mmp27D3YV89 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mmp27D3YV89 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Mmp27D3YV89 AC153524.1-201ENSMUST00000220436 1935 ntBASIC17.8■□□□□ 0.44
Mmp27D3YV89 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Mmp27D3YV89 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Mmp27D3YV89 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Mmp27D3YV89 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Mmp27D3YV89 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Mmp27D3YV89 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mmp27D3YV89 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mmp27D3YV89 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mmp27D3YV89 Terc-201ENSMUST00000082862 423 ntBASIC17.79■□□□□ 0.44
Mmp27D3YV89 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mmp27D3YV89 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Mmp27D3YV89 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mmp27D3YV89 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Mmp27D3YV89 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mmp27D3YV89 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.78■□□□□ 0.44
Mmp27D3YV89 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Mmp27D3YV89 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mmp27D3YV89 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mmp27D3YV89 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mmp27D3YV89 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Mmp27D3YV89 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Mmp27D3YV89 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Mmp27D3YV89 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Mmp27D3YV89 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mmp27D3YV89 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mmp27D3YV89 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mmp27D3YV89 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mmp27D3YV89 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mmp27D3YV89 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC17.78■□□□□ 0.44
Mmp27D3YV89 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Mmp27D3YV89 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Mmp27D3YV89 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC17.77■□□□□ 0.44
Mmp27D3YV89 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Mmp27D3YV89 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Mmp27D3YV89 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mmp27D3YV89 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mmp27D3YV89 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mmp27D3YV89 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mmp27D3YV89 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mmp27D3YV89 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC17.76■□□□□ 0.43
Mmp27D3YV89 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Mmp27D3YV89 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Mmp27D3YV89 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mmp27D3YV89 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mmp27D3YV89 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Mmp27D3YV89 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Mmp27D3YV89 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Mmp27D3YV89 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC17.75■□□□□ 0.43
Mmp27D3YV89 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Mmp27D3YV89 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Mmp27D3YV89 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Mmp27D3YV89 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Mmp27D3YV89 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Mmp27D3YV89 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Mmp27D3YV89 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Mmp27D3YV89 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.74■□□□□ 0.43
Mmp27D3YV89 Cap2-205ENSMUST00000225824 1634 ntBASIC17.74■□□□□ 0.43
Mmp27D3YV89 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms