Protein–RNA interactions for Protein: C0HKE2

Hist1h2ac, Histone H2A type 1-C, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2acC0HKE2 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hist1h2acC0HKE2 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hist1h2acC0HKE2 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hist1h2acC0HKE2 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hist1h2acC0HKE2 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Hist1h2acC0HKE2 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hist1h2acC0HKE2 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hist1h2acC0HKE2 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.42■□□□□ 0.7
Hist1h2acC0HKE2 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hist1h2acC0HKE2 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Hist1h2acC0HKE2 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hist1h2acC0HKE2 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.41■□□□□ 0.7
Hist1h2acC0HKE2 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hist1h2acC0HKE2 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hist1h2acC0HKE2 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.41■□□□□ 0.7
Hist1h2acC0HKE2 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.41■□□□□ 0.7
Hist1h2acC0HKE2 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Hist1h2acC0HKE2 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Hist1h2acC0HKE2 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hist1h2acC0HKE2 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.4■□□□□ 0.7
Hist1h2acC0HKE2 Gm11175-201ENSMUST00000116172 543 ntBASIC19.4■□□□□ 0.7
Hist1h2acC0HKE2 Gm27502-201ENSMUST00000183495 199 ntBASIC19.4■□□□□ 0.7
Hist1h2acC0HKE2 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Hist1h2acC0HKE2 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hist1h2acC0HKE2 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.4■□□□□ 0.7
Hist1h2acC0HKE2 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Hist1h2acC0HKE2 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Hist1h2acC0HKE2 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.4■□□□□ 0.7
Hist1h2acC0HKE2 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Hist1h2acC0HKE2 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Hist1h2acC0HKE2 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Hist1h2acC0HKE2 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Hist1h2acC0HKE2 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.39■□□□□ 0.69
Hist1h2acC0HKE2 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Hist1h2acC0HKE2 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hist1h2acC0HKE2 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hist1h2acC0HKE2 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Hist1h2acC0HKE2 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hist1h2acC0HKE2 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hist1h2acC0HKE2 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.38■□□□□ 0.69
Hist1h2acC0HKE2 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Hist1h2acC0HKE2 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hist1h2acC0HKE2 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Hist1h2acC0HKE2 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hist1h2acC0HKE2 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hist1h2acC0HKE2 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Hist1h2acC0HKE2 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Hist1h2acC0HKE2 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Hist1h2acC0HKE2 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hist1h2acC0HKE2 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hist1h2acC0HKE2 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Hist1h2acC0HKE2 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.37■□□□□ 0.69
Hist1h2acC0HKE2 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hist1h2acC0HKE2 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hist1h2acC0HKE2 Gm14523-201ENSMUST00000117260 558 ntBASIC19.36■□□□□ 0.69
Hist1h2acC0HKE2 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hist1h2acC0HKE2 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hist1h2acC0HKE2 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hist1h2acC0HKE2 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hist1h2acC0HKE2 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hist1h2acC0HKE2 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hist1h2acC0HKE2 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Hist1h2acC0HKE2 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.35■□□□□ 0.69
Hist1h2acC0HKE2 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.35■□□□□ 0.69
Hist1h2acC0HKE2 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.35■□□□□ 0.69
Hist1h2acC0HKE2 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hist1h2acC0HKE2 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hist1h2acC0HKE2 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hist1h2acC0HKE2 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hist1h2acC0HKE2 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Hist1h2acC0HKE2 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hist1h2acC0HKE2 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hist1h2acC0HKE2 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Hist1h2acC0HKE2 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hist1h2acC0HKE2 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hist1h2acC0HKE2 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hist1h2acC0HKE2 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hist1h2acC0HKE2 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hist1h2acC0HKE2 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hist1h2acC0HKE2 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hist1h2acC0HKE2 Gm7332-201ENSMUST00000118351 454 ntBASIC19.33■□□□□ 0.68
Hist1h2acC0HKE2 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.33■□□□□ 0.68
Hist1h2acC0HKE2 Mir6538-201ENSMUST00000183713 110 ntBASIC19.33■□□□□ 0.68
Hist1h2acC0HKE2 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.33■□□□□ 0.68
Hist1h2acC0HKE2 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hist1h2acC0HKE2 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hist1h2acC0HKE2 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hist1h2acC0HKE2 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.33■□□□□ 0.68
Hist1h2acC0HKE2 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hist1h2acC0HKE2 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Hist1h2acC0HKE2 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hist1h2acC0HKE2 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Hist1h2acC0HKE2 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hist1h2acC0HKE2 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.32■□□□□ 0.68
Hist1h2acC0HKE2 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Hist1h2acC0HKE2 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Hist1h2acC0HKE2 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hist1h2acC0HKE2 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hist1h2acC0HKE2 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hist1h2acC0HKE2 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms