Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Gm12887B1AVM1 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm12887B1AVM1 Gm13889-201ENSMUST00000099689 1386 ntBASIC17.21■□□□□ 0.35
Gm12887B1AVM1 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Gm12887B1AVM1 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm12887B1AVM1 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.21■□□□□ 0.35
Gm12887B1AVM1 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Gm12887B1AVM1 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.21■□□□□ 0.35
Gm12887B1AVM1 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Gm12887B1AVM1 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.34
Gm12887B1AVM1 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm12887B1AVM1 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm12887B1AVM1 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm12887B1AVM1 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Gm12887B1AVM1 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Gm12887B1AVM1 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm12887B1AVM1 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm12887B1AVM1 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm12887B1AVM1 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm12887B1AVM1 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Gm12887B1AVM1 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm12887B1AVM1 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm12887B1AVM1 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm12887B1AVM1 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm12887B1AVM1 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Gm12887B1AVM1 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm12887B1AVM1 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Gm12887B1AVM1 AC153911.1-201ENSMUST00000220378 758 ntBASIC17.18■□□□□ 0.34
Gm12887B1AVM1 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm12887B1AVM1 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm12887B1AVM1 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm12887B1AVM1 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Gm12887B1AVM1 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Gm12887B1AVM1 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm12887B1AVM1 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Gm12887B1AVM1 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.17■□□□□ 0.34
Gm12887B1AVM1 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm12887B1AVM1 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm12887B1AVM1 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Gm12887B1AVM1 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Gm12887B1AVM1 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm12887B1AVM1 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm12887B1AVM1 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm12887B1AVM1 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Gm12887B1AVM1 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
Gm12887B1AVM1 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Gm12887B1AVM1 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC17.16■□□□□ 0.34
Gm12887B1AVM1 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Gm12887B1AVM1 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm12887B1AVM1 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Gm12887B1AVM1 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.16■□□□□ 0.34
Gm12887B1AVM1 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm12887B1AVM1 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm12887B1AVM1 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm12887B1AVM1 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Gm12887B1AVM1 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Gm12887B1AVM1 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm12887B1AVM1 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gm12887B1AVM1 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gm12887B1AVM1 Gm4799-201ENSMUST00000095396 657 ntBASIC17.15■□□□□ 0.34
Gm12887B1AVM1 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm12887B1AVM1 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm12887B1AVM1 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Gm12887B1AVM1 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm12887B1AVM1 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Gm12887B1AVM1 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Gm12887B1AVM1 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Gm12887B1AVM1 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm12887B1AVM1 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm12887B1AVM1 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm12887B1AVM1 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm12887B1AVM1 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Gm12887B1AVM1 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm12887B1AVM1 Gm9812-201ENSMUST00000061934 968 ntBASIC17.14■□□□□ 0.33
Gm12887B1AVM1 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Gm12887B1AVM1 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm12887B1AVM1 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm12887B1AVM1 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm12887B1AVM1 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm12887B1AVM1 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm12887B1AVM1 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm12887B1AVM1 AC122317.2-201ENSMUST00000218708 1248 ntBASIC17.13■□□□□ 0.33
Gm12887B1AVM1 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Gm12887B1AVM1 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.13■□□□□ 0.33
Gm12887B1AVM1 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm12887B1AVM1 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.13■□□□□ 0.33
Gm12887B1AVM1 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm12887B1AVM1 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm12887B1AVM1 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm12887B1AVM1 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm12887B1AVM1 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm12887B1AVM1 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm12887B1AVM1 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC17.12■□□□□ 0.33
Gm12887B1AVM1 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm12887B1AVM1 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm12887B1AVM1 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm12887B1AVM1 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Gm12887B1AVM1 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm12887B1AVM1 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm12887B1AVM1 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms