Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col6a5A6H584 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col6a5A6H584 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col6a5A6H584 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC16.64■□□□□ 0.25
Col6a5A6H584 Gm42642-201ENSMUST00000200683 355 ntBASIC16.64■□□□□ 0.25
Col6a5A6H584 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Col6a5A6H584 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col6a5A6H584 Gm8093-201ENSMUST00000128935 1892 ntBASIC16.64■□□□□ 0.25
Col6a5A6H584 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col6a5A6H584 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.64■□□□□ 0.25
Col6a5A6H584 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col6a5A6H584 Gm9207-201ENSMUST00000198773 1115 ntBASIC16.64■□□□□ 0.25
Col6a5A6H584 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col6a5A6H584 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Col6a5A6H584 Gm43173-201ENSMUST00000202246 593 ntBASIC16.63■□□□□ 0.25
Col6a5A6H584 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col6a5A6H584 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Col6a5A6H584 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Col6a5A6H584 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col6a5A6H584 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col6a5A6H584 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Col6a5A6H584 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col6a5A6H584 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC16.62■□□□□ 0.25
Col6a5A6H584 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col6a5A6H584 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC16.62■□□□□ 0.25
Col6a5A6H584 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col6a5A6H584 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col6a5A6H584 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col6a5A6H584 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col6a5A6H584 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col6a5A6H584 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Col6a5A6H584 Gm26833-201ENSMUST00000180899 440 ntBASIC16.61■□□□□ 0.25
Col6a5A6H584 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col6a5A6H584 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
Col6a5A6H584 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC16.61■□□□□ 0.25
Col6a5A6H584 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.61■□□□□ 0.25
Col6a5A6H584 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Col6a5A6H584 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col6a5A6H584 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Col6a5A6H584 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Col6a5A6H584 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col6a5A6H584 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Col6a5A6H584 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col6a5A6H584 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Col6a5A6H584 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col6a5A6H584 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Col6a5A6H584 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col6a5A6H584 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.6■□□□□ 0.25
Col6a5A6H584 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
Col6a5A6H584 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col6a5A6H584 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Col6a5A6H584 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.59■□□□□ 0.25
Col6a5A6H584 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Col6a5A6H584 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.59■□□□□ 0.25
Col6a5A6H584 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Col6a5A6H584 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col6a5A6H584 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Col6a5A6H584 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.25
Col6a5A6H584 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.58■□□□□ 0.25
Col6a5A6H584 Gm8493-201ENSMUST00000196881 489 ntBASIC16.58■□□□□ 0.25
Col6a5A6H584 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Col6a5A6H584 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Col6a5A6H584 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Col6a5A6H584 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Col6a5A6H584 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col6a5A6H584 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Col6a5A6H584 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col6a5A6H584 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC16.56■□□□□ 0.24
Col6a5A6H584 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC16.56■□□□□ 0.24
Col6a5A6H584 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col6a5A6H584 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC16.56■□□□□ 0.24
Col6a5A6H584 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col6a5A6H584 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Col6a5A6H584 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Col6a5A6H584 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col6a5A6H584 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Col6a5A6H584 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Col6a5A6H584 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC16.54■□□□□ 0.24
Col6a5A6H584 Gm22325-201ENSMUST00000158904 308 ntBASIC16.54■□□□□ 0.24
Col6a5A6H584 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC16.54■□□□□ 0.24
Col6a5A6H584 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col6a5A6H584 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col6a5A6H584 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC16.54■□□□□ 0.24
Col6a5A6H584 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Col6a5A6H584 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC16.53■□□□□ 0.24
Col6a5A6H584 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col6a5A6H584 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col6a5A6H584 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col6a5A6H584 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC16.52■□□□□ 0.23
Col6a5A6H584 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC16.52■□□□□ 0.23
Col6a5A6H584 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC16.52■□□□□ 0.23
Col6a5A6H584 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Col6a5A6H584 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col6a5A6H584 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col6a5A6H584 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col6a5A6H584 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col6a5A6H584 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col6a5A6H584 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC16.51■□□□□ 0.23
Col6a5A6H584 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.51■□□□□ 0.23
Col6a5A6H584 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms