Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 AC156953.1-201ENSMUST00000196953 70 ntBASIC11.73□□□□□ -0.53
Ubr4A2AN08 AC157822.2-201ENSMUST00000200291 70 ntBASIC11.73□□□□□ -0.53
Ubr4A2AN08 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
Ubr4A2AN08 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC11.73□□□□□ -0.53
Ubr4A2AN08 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ubr4A2AN08 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ubr4A2AN08 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ubr4A2AN08 Gm43137-201ENSMUST00000198052 594 ntBASIC11.73□□□□□ -0.53
Ubr4A2AN08 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ubr4A2AN08 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ubr4A2AN08 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ubr4A2AN08 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC11.72□□□□□ -0.53
Ubr4A2AN08 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ubr4A2AN08 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ubr4A2AN08 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ubr4A2AN08 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Ubr4A2AN08 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ubr4A2AN08 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ubr4A2AN08 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC11.72□□□□□ -0.53
Ubr4A2AN08 Gm8493-201ENSMUST00000196881 489 ntBASIC11.72□□□□□ -0.53
Ubr4A2AN08 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ubr4A2AN08 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC11.71□□□□□ -0.53
Ubr4A2AN08 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Ubr4A2AN08 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ubr4A2AN08 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC11.71□□□□□ -0.53
Ubr4A2AN08 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ubr4A2AN08 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ubr4A2AN08 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ubr4A2AN08 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ubr4A2AN08 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ubr4A2AN08 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ubr4A2AN08 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ubr4A2AN08 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC11.71□□□□□ -0.54
Ubr4A2AN08 Mir6982-201ENSMUST00000184354 68 ntBASIC11.71□□□□□ -0.54
Ubr4A2AN08 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ubr4A2AN08 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Ubr4A2AN08 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC11.7□□□□□ -0.54
Ubr4A2AN08 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ubr4A2AN08 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ubr4A2AN08 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC11.7□□□□□ -0.54
Ubr4A2AN08 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC11.7□□□□□ -0.54
Ubr4A2AN08 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ubr4A2AN08 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ubr4A2AN08 Gm12933-201ENSMUST00000120203 872 ntBASIC11.69□□□□□ -0.54
Ubr4A2AN08 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ubr4A2AN08 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ubr4A2AN08 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ubr4A2AN08 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Ubr4A2AN08 Gm13836-201ENSMUST00000121159 501 ntBASIC11.69□□□□□ -0.54
Ubr4A2AN08 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC11.69□□□□□ -0.54
Ubr4A2AN08 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ubr4A2AN08 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ubr4A2AN08 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ubr4A2AN08 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ubr4A2AN08 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC11.68□□□□□ -0.54
Ubr4A2AN08 Gm10033-202ENSMUST00000211874 928 ntBASIC11.68□□□□□ -0.54
Ubr4A2AN08 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC11.68□□□□□ -0.54
Ubr4A2AN08 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ubr4A2AN08 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ubr4A2AN08 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC11.68□□□□□ -0.54
Ubr4A2AN08 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC11.68□□□□□ -0.54
Ubr4A2AN08 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ubr4A2AN08 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC11.68□□□□□ -0.54
Ubr4A2AN08 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ubr4A2AN08 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
Ubr4A2AN08 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ubr4A2AN08 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ubr4A2AN08 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC11.67□□□□□ -0.54
Ubr4A2AN08 Gm43173-201ENSMUST00000202246 593 ntBASIC11.67□□□□□ -0.54
Ubr4A2AN08 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ubr4A2AN08 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ubr4A2AN08 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ubr4A2AN08 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC11.67□□□□□ -0.54
Ubr4A2AN08 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ubr4A2AN08 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ubr4A2AN08 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Ubr4A2AN08 Gm29994-201ENSMUST00000195495 1193 ntBASIC11.67□□□□□ -0.54
Ubr4A2AN08 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC11.67□□□□□ -0.54
Ubr4A2AN08 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Ubr4A2AN08 Gm43060-201ENSMUST00000200621 289 ntBASIC11.66□□□□□ -0.54
Ubr4A2AN08 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Ubr4A2AN08 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Ubr4A2AN08 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC11.66□□□□□ -0.54
Ubr4A2AN08 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ubr4A2AN08 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ubr4A2AN08 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Ubr4A2AN08 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC11.66□□□□□ -0.54
Ubr4A2AN08 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ubr4A2AN08 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC11.66□□□□□ -0.54
Ubr4A2AN08 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ubr4A2AN08 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Ubr4A2AN08 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ubr4A2AN08 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ubr4A2AN08 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ubr4A2AN08 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ubr4A2AN08 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ubr4A2AN08 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC11.65□□□□□ -0.54
Ubr4A2AN08 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ubr4A2AN08 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ubr4A2AN08 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 104.9 ms