Protein–RNA interactions for Protein: A0A0G2JGB9

Trdv2-1, T cell receptor delta variable 2-1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv2-1A0A0G2JGB9 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trdv2-1A0A0G2JGB9 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Trdv2-1A0A0G2JGB9 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trdv2-1A0A0G2JGB9 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
Trdv2-1A0A0G2JGB9 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Trdv2-1A0A0G2JGB9 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Trdv2-1A0A0G2JGB9 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trdv2-1A0A0G2JGB9 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trdv2-1A0A0G2JGB9 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trdv2-1A0A0G2JGB9 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trdv2-1A0A0G2JGB9 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trdv2-1A0A0G2JGB9 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trdv2-1A0A0G2JGB9 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trdv2-1A0A0G2JGB9 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trdv2-1A0A0G2JGB9 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trdv2-1A0A0G2JGB9 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trdv2-1A0A0G2JGB9 Gm8093-201ENSMUST00000128935 1892 ntBASIC15.57■□□□□ 0.08
Trdv2-1A0A0G2JGB9 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trdv2-1A0A0G2JGB9 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trdv2-1A0A0G2JGB9 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Trdv2-1A0A0G2JGB9 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Trdv2-1A0A0G2JGB9 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trdv2-1A0A0G2JGB9 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trdv2-1A0A0G2JGB9 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trdv2-1A0A0G2JGB9 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trdv2-1A0A0G2JGB9 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trdv2-1A0A0G2JGB9 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trdv2-1A0A0G2JGB9 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trdv2-1A0A0G2JGB9 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trdv2-1A0A0G2JGB9 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trdv2-1A0A0G2JGB9 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trdv2-1A0A0G2JGB9 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC15.56■□□□□ 0.08
Trdv2-1A0A0G2JGB9 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trdv2-1A0A0G2JGB9 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trdv2-1A0A0G2JGB9 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trdv2-1A0A0G2JGB9 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trdv2-1A0A0G2JGB9 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trdv2-1A0A0G2JGB9 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Trdv2-1A0A0G2JGB9 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
Trdv2-1A0A0G2JGB9 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trdv2-1A0A0G2JGB9 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trdv2-1A0A0G2JGB9 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trdv2-1A0A0G2JGB9 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trdv2-1A0A0G2JGB9 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trdv2-1A0A0G2JGB9 Gm45855-201ENSMUST00000212546 880 ntBASIC15.55■□□□□ 0.08
Trdv2-1A0A0G2JGB9 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trdv2-1A0A0G2JGB9 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trdv2-1A0A0G2JGB9 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trdv2-1A0A0G2JGB9 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Trdv2-1A0A0G2JGB9 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Trdv2-1A0A0G2JGB9 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC15.54■□□□□ 0.08
Trdv2-1A0A0G2JGB9 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trdv2-1A0A0G2JGB9 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trdv2-1A0A0G2JGB9 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Trdv2-1A0A0G2JGB9 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trdv2-1A0A0G2JGB9 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trdv2-1A0A0G2JGB9 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trdv2-1A0A0G2JGB9 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trdv2-1A0A0G2JGB9 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trdv2-1A0A0G2JGB9 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Trdv2-1A0A0G2JGB9 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trdv2-1A0A0G2JGB9 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trdv2-1A0A0G2JGB9 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC15.52■□□□□ 0.08
Trdv2-1A0A0G2JGB9 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Trdv2-1A0A0G2JGB9 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC15.52■□□□□ 0.08
Trdv2-1A0A0G2JGB9 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trdv2-1A0A0G2JGB9 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trdv2-1A0A0G2JGB9 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trdv2-1A0A0G2JGB9 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Trdv2-1A0A0G2JGB9 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trdv2-1A0A0G2JGB9 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trdv2-1A0A0G2JGB9 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trdv2-1A0A0G2JGB9 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC15.51■□□□□ 0.07
Trdv2-1A0A0G2JGB9 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Trdv2-1A0A0G2JGB9 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC15.51■□□□□ 0.07
Trdv2-1A0A0G2JGB9 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC15.51■□□□□ 0.07
Trdv2-1A0A0G2JGB9 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trdv2-1A0A0G2JGB9 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trdv2-1A0A0G2JGB9 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trdv2-1A0A0G2JGB9 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trdv2-1A0A0G2JGB9 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trdv2-1A0A0G2JGB9 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trdv2-1A0A0G2JGB9 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trdv2-1A0A0G2JGB9 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trdv2-1A0A0G2JGB9 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Trdv2-1A0A0G2JGB9 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trdv2-1A0A0G2JGB9 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trdv2-1A0A0G2JGB9 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trdv2-1A0A0G2JGB9 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trdv2-1A0A0G2JGB9 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trdv2-1A0A0G2JGB9 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Trdv2-1A0A0G2JGB9 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC15.49■□□□□ 0.07
Trdv2-1A0A0G2JGB9 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Trdv2-1A0A0G2JGB9 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Trdv2-1A0A0G2JGB9 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trdv2-1A0A0G2JGB9 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trdv2-1A0A0G2JGB9 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trdv2-1A0A0G2JGB9 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trdv2-1A0A0G2JGB9 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trdv2-1A0A0G2JGB9 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms