Protein–RNA interactions for Protein: A0A075B695

Trav9d-3, T cell receptor alpha variable 9D-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-3A0A075B695 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav9d-3A0A075B695 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav9d-3A0A075B695 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav9d-3A0A075B695 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav9d-3A0A075B695 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav9d-3A0A075B695 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav9d-3A0A075B695 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav9d-3A0A075B695 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Trav9d-3A0A075B695 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav9d-3A0A075B695 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav9d-3A0A075B695 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav9d-3A0A075B695 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC15.13■□□□□ 0.01
Trav9d-3A0A075B695 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC15.13■□□□□ 0.01
Trav9d-3A0A075B695 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Trav9d-3A0A075B695 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav9d-3A0A075B695 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav9d-3A0A075B695 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav9d-3A0A075B695 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav9d-3A0A075B695 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav9d-3A0A075B695 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav9d-3A0A075B695 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav9d-3A0A075B695 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav9d-3A0A075B695 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav9d-3A0A075B695 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav9d-3A0A075B695 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC15.12■□□□□ 0.01
Trav9d-3A0A075B695 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav9d-3A0A075B695 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav9d-3A0A075B695 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav9d-3A0A075B695 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav9d-3A0A075B695 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav9d-3A0A075B695 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC15.12■□□□□ 0.01
Trav9d-3A0A075B695 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Trav9d-3A0A075B695 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav9d-3A0A075B695 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav9d-3A0A075B695 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC15.11■□□□□ 0.01
Trav9d-3A0A075B695 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav9d-3A0A075B695 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav9d-3A0A075B695 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav9d-3A0A075B695 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav9d-3A0A075B695 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav9d-3A0A075B695 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9d-3A0A075B695 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9d-3A0A075B695 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9d-3A0A075B695 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9d-3A0A075B695 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav9d-3A0A075B695 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC15.1■□□□□ 0.01
Trav9d-3A0A075B695 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9d-3A0A075B695 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9d-3A0A075B695 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9d-3A0A075B695 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trav9d-3A0A075B695 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trav9d-3A0A075B695 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trav9d-3A0A075B695 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trav9d-3A0A075B695 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav9d-3A0A075B695 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav9d-3A0A075B695 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav9d-3A0A075B695 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC15.09■□□□□ 0.01
Trav9d-3A0A075B695 Gm12366-201ENSMUST00000121722 873 ntBASIC15.09■□□□□ 0.01
Trav9d-3A0A075B695 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav9d-3A0A075B695 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC15.09■□□□□ 0.01
Trav9d-3A0A075B695 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC15.09■□□□□ 0.01
Trav9d-3A0A075B695 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav9d-3A0A075B695 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC15.09■□□□□ 0.01
Trav9d-3A0A075B695 Gm5786-201ENSMUST00000085368 882 ntBASIC15.09■□□□□ 0.01
Trav9d-3A0A075B695 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav9d-3A0A075B695 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav9d-3A0A075B695 AC153962.1-201ENSMUST00000218530 1948 ntBASIC15.09■□□□□ 0.01
Trav9d-3A0A075B695 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trav9d-3A0A075B695 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trav9d-3A0A075B695 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav9d-3A0A075B695 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trav9d-3A0A075B695 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav9d-3A0A075B695 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trav9d-3A0A075B695 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav9d-3A0A075B695 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC15.08■□□□□ 0
Trav9d-3A0A075B695 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Trav9d-3A0A075B695 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav9d-3A0A075B695 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav9d-3A0A075B695 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav9d-3A0A075B695 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav9d-3A0A075B695 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC15.08■□□□□ 0
Trav9d-3A0A075B695 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav9d-3A0A075B695 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav9d-3A0A075B695 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav9d-3A0A075B695 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav9d-3A0A075B695 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
Trav9d-3A0A075B695 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav9d-3A0A075B695 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav9d-3A0A075B695 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav9d-3A0A075B695 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC15.08■□□□□ 0
Trav9d-3A0A075B695 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav9d-3A0A075B695 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav9d-3A0A075B695 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC15.07■□□□□ 0
Trav9d-3A0A075B695 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC15.07■□□□□ 0
Trav9d-3A0A075B695 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav9d-3A0A075B695 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav9d-3A0A075B695 Dmtn-209ENSMUST00000228295 2572 ntBASIC15.07■□□□□ 0
Trav9d-3A0A075B695 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav9d-3A0A075B695 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav9d-3A0A075B695 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms