Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav12-3A0A075B648 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Trav12-3A0A075B648 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav12-3A0A075B648 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav12-3A0A075B648 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Trav12-3A0A075B648 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav12-3A0A075B648 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav12-3A0A075B648 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav12-3A0A075B648 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav12-3A0A075B648 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav12-3A0A075B648 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav12-3A0A075B648 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav12-3A0A075B648 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC15.56■□□□□ 0.08
Trav12-3A0A075B648 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav12-3A0A075B648 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav12-3A0A075B648 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC15.56■□□□□ 0.08
Trav12-3A0A075B648 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav12-3A0A075B648 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav12-3A0A075B648 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Trav12-3A0A075B648 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav12-3A0A075B648 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav12-3A0A075B648 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav12-3A0A075B648 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav12-3A0A075B648 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav12-3A0A075B648 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav12-3A0A075B648 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav12-3A0A075B648 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav12-3A0A075B648 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav12-3A0A075B648 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav12-3A0A075B648 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav12-3A0A075B648 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav12-3A0A075B648 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trav12-3A0A075B648 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
Trav12-3A0A075B648 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav12-3A0A075B648 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav12-3A0A075B648 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav12-3A0A075B648 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav12-3A0A075B648 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav12-3A0A075B648 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC15.54■□□□□ 0.08
Trav12-3A0A075B648 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav12-3A0A075B648 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav12-3A0A075B648 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Trav12-3A0A075B648 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav12-3A0A075B648 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav12-3A0A075B648 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav12-3A0A075B648 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav12-3A0A075B648 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav12-3A0A075B648 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC15.53■□□□□ 0.08
Trav12-3A0A075B648 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav12-3A0A075B648 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav12-3A0A075B648 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav12-3A0A075B648 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Trav12-3A0A075B648 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav12-3A0A075B648 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav12-3A0A075B648 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Trav12-3A0A075B648 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC15.52■□□□□ 0.07
Trav12-3A0A075B648 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav12-3A0A075B648 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Trav12-3A0A075B648 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trav12-3A0A075B648 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav12-3A0A075B648 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Trav12-3A0A075B648 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav12-3A0A075B648 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav12-3A0A075B648 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC15.51■□□□□ 0.07
Trav12-3A0A075B648 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC15.51■□□□□ 0.07
Trav12-3A0A075B648 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav12-3A0A075B648 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Trav12-3A0A075B648 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav12-3A0A075B648 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav12-3A0A075B648 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav12-3A0A075B648 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC15.51■□□□□ 0.07
Trav12-3A0A075B648 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav12-3A0A075B648 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Trav12-3A0A075B648 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC15.5■□□□□ 0.07
Trav12-3A0A075B648 Gm43545-201ENSMUST00000196765 2779 ntBASIC15.5■□□□□ 0.07
Trav12-3A0A075B648 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav12-3A0A075B648 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC15.5■□□□□ 0.07
Trav12-3A0A075B648 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav12-3A0A075B648 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav12-3A0A075B648 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav12-3A0A075B648 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC15.5■□□□□ 0.07
Trav12-3A0A075B648 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav12-3A0A075B648 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav12-3A0A075B648 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav12-3A0A075B648 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav12-3A0A075B648 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav12-3A0A075B648 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC15.5■□□□□ 0.07
Trav12-3A0A075B648 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav12-3A0A075B648 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav12-3A0A075B648 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav12-3A0A075B648 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav12-3A0A075B648 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav12-3A0A075B648 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav12-3A0A075B648 Snhg20-203ENSMUST00000182811 2153 ntBASIC15.49■□□□□ 0.07
Trav12-3A0A075B648 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav12-3A0A075B648 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav12-3A0A075B648 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav12-3A0A075B648 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav12-3A0A075B648 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Trav12-3A0A075B648 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms