Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Smarcb1Q9Z0H3 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcb1Q9Z0H3 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Smarcb1Q9Z0H3 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcb1Q9Z0H3 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcb1Q9Z0H3 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcb1Q9Z0H3 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcb1Q9Z0H3 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcb1Q9Z0H3 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcb1Q9Z0H3 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcb1Q9Z0H3 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcb1Q9Z0H3 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC13.66□□□□□ -0.22
Smarcb1Q9Z0H3 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcb1Q9Z0H3 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcb1Q9Z0H3 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcb1Q9Z0H3 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcb1Q9Z0H3 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcb1Q9Z0H3 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcb1Q9Z0H3 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcb1Q9Z0H3 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC13.66□□□□□ -0.22
Smarcb1Q9Z0H3 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.66□□□□□ -0.22
Smarcb1Q9Z0H3 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC13.66□□□□□ -0.22
Smarcb1Q9Z0H3 Gm24548-201ENSMUST00000158650 108 ntBASIC13.66□□□□□ -0.22
Smarcb1Q9Z0H3 Mir6420-201ENSMUST00000185032 102 ntBASIC13.66□□□□□ -0.22
Smarcb1Q9Z0H3 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.66□□□□□ -0.22
Smarcb1Q9Z0H3 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcb1Q9Z0H3 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcb1Q9Z0H3 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcb1Q9Z0H3 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.66□□□□□ -0.22
Smarcb1Q9Z0H3 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcb1Q9Z0H3 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcb1Q9Z0H3 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcb1Q9Z0H3 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcb1Q9Z0H3 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcb1Q9Z0H3 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.66□□□□□ -0.22
Smarcb1Q9Z0H3 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcb1Q9Z0H3 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcb1Q9Z0H3 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcb1Q9Z0H3 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcb1Q9Z0H3 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcb1Q9Z0H3 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcb1Q9Z0H3 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcb1Q9Z0H3 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.65□□□□□ -0.22
Smarcb1Q9Z0H3 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcb1Q9Z0H3 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.65□□□□□ -0.22
Smarcb1Q9Z0H3 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcb1Q9Z0H3 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcb1Q9Z0H3 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcb1Q9Z0H3 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC13.65□□□□□ -0.22
Smarcb1Q9Z0H3 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcb1Q9Z0H3 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.65□□□□□ -0.22
Smarcb1Q9Z0H3 Gm7809-201ENSMUST00000153199 742 ntBASIC13.65□□□□□ -0.22
Smarcb1Q9Z0H3 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
Smarcb1Q9Z0H3 Gm6222-202ENSMUST00000182143 629 ntBASIC13.65□□□□□ -0.22
Smarcb1Q9Z0H3 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcb1Q9Z0H3 Gm8099-201ENSMUST00000200510 742 ntBASIC13.65□□□□□ -0.22
Smarcb1Q9Z0H3 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcb1Q9Z0H3 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.65□□□□□ -0.22
Smarcb1Q9Z0H3 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Smarcb1Q9Z0H3 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcb1Q9Z0H3 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcb1Q9Z0H3 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcb1Q9Z0H3 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcb1Q9Z0H3 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.65□□□□□ -0.22
Smarcb1Q9Z0H3 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcb1Q9Z0H3 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.65□□□□□ -0.22
Smarcb1Q9Z0H3 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.65□□□□□ -0.22
Smarcb1Q9Z0H3 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcb1Q9Z0H3 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Smarcb1Q9Z0H3 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcb1Q9Z0H3 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcb1Q9Z0H3 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcb1Q9Z0H3 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcb1Q9Z0H3 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcb1Q9Z0H3 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcb1Q9Z0H3 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.65□□□□□ -0.23
Smarcb1Q9Z0H3 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.65□□□□□ -0.23
Smarcb1Q9Z0H3 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.23
Smarcb1Q9Z0H3 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.64□□□□□ -0.23
Smarcb1Q9Z0H3 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcb1Q9Z0H3 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Smarcb1Q9Z0H3 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcb1Q9Z0H3 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcb1Q9Z0H3 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcb1Q9Z0H3 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Smarcb1Q9Z0H3 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcb1Q9Z0H3 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.64□□□□□ -0.23
Smarcb1Q9Z0H3 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcb1Q9Z0H3 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.64□□□□□ -0.23
Smarcb1Q9Z0H3 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Smarcb1Q9Z0H3 Gm13786-201ENSMUST00000122371 333 ntBASIC13.64□□□□□ -0.23
Smarcb1Q9Z0H3 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcb1Q9Z0H3 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.64□□□□□ -0.23
Smarcb1Q9Z0H3 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC13.64□□□□□ -0.23
Smarcb1Q9Z0H3 Gm3890-201ENSMUST00000182416 207 ntBASIC13.64□□□□□ -0.23
Smarcb1Q9Z0H3 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Smarcb1Q9Z0H3 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.64□□□□□ -0.23
Smarcb1Q9Z0H3 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.64□□□□□ -0.23
Smarcb1Q9Z0H3 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC13.64□□□□□ -0.23
Smarcb1Q9Z0H3 Gm18935-201ENSMUST00000212692 664 ntBASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms