Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
CcsQ9WU84 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CcsQ9WU84 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CcsQ9WU84 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
CcsQ9WU84 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC10.28□□□□□ -0.76
CcsQ9WU84 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
CcsQ9WU84 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC10.28□□□□□ -0.76
CcsQ9WU84 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
CcsQ9WU84 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
CcsQ9WU84 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC10.28□□□□□ -0.76
CcsQ9WU84 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CcsQ9WU84 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
CcsQ9WU84 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC10.28□□□□□ -0.76
CcsQ9WU84 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CcsQ9WU84 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CcsQ9WU84 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC10.28□□□□□ -0.76
CcsQ9WU84 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CcsQ9WU84 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CcsQ9WU84 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CcsQ9WU84 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
CcsQ9WU84 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
CcsQ9WU84 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CcsQ9WU84 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
CcsQ9WU84 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
CcsQ9WU84 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.76
CcsQ9WU84 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
CcsQ9WU84 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC10.27□□□□□ -0.76
CcsQ9WU84 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
CcsQ9WU84 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.76
CcsQ9WU84 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
CcsQ9WU84 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
CcsQ9WU84 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
CcsQ9WU84 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
CcsQ9WU84 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
CcsQ9WU84 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
CcsQ9WU84 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10.27□□□□□ -0.77
CcsQ9WU84 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
CcsQ9WU84 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CcsQ9WU84 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
CcsQ9WU84 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CcsQ9WU84 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
CcsQ9WU84 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC10.27□□□□□ -0.77
CcsQ9WU84 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CcsQ9WU84 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CcsQ9WU84 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CcsQ9WU84 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
CcsQ9WU84 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
CcsQ9WU84 Gm6539-201ENSMUST00000119157 1064 ntBASIC10.27□□□□□ -0.77
CcsQ9WU84 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC10.27□□□□□ -0.77
CcsQ9WU84 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
CcsQ9WU84 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
CcsQ9WU84 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
CcsQ9WU84 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC10.27□□□□□ -0.77
CcsQ9WU84 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
CcsQ9WU84 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
CcsQ9WU84 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CcsQ9WU84 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
CcsQ9WU84 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
CcsQ9WU84 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
CcsQ9WU84 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
CcsQ9WU84 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
CcsQ9WU84 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CcsQ9WU84 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
CcsQ9WU84 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CcsQ9WU84 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
CcsQ9WU84 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
CcsQ9WU84 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CcsQ9WU84 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
CcsQ9WU84 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CcsQ9WU84 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
CcsQ9WU84 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CcsQ9WU84 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC10.27□□□□□ -0.77
CcsQ9WU84 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CcsQ9WU84 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
CcsQ9WU84 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CcsQ9WU84 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CcsQ9WU84 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CcsQ9WU84 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CcsQ9WU84 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CcsQ9WU84 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC10.26□□□□□ -0.77
CcsQ9WU84 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
CcsQ9WU84 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
CcsQ9WU84 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
CcsQ9WU84 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CcsQ9WU84 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC10.26□□□□□ -0.77
CcsQ9WU84 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CcsQ9WU84 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CcsQ9WU84 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CcsQ9WU84 AC164565.1-201ENSMUST00000217520 1484 ntBASIC10.26□□□□□ -0.77
CcsQ9WU84 CT009757.3-201ENSMUST00000223367 2320 ntBASIC10.26□□□□□ -0.77
CcsQ9WU84 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
CcsQ9WU84 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CcsQ9WU84 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC10.26□□□□□ -0.77
CcsQ9WU84 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC10.26□□□□□ -0.77
CcsQ9WU84 Gm5479-201ENSMUST00000160578 435 ntBASIC10.26□□□□□ -0.77
CcsQ9WU84 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC10.26□□□□□ -0.77
CcsQ9WU84 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CcsQ9WU84 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CcsQ9WU84 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CcsQ9WU84 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms