Protein–RNA interactions for Protein: Q9WU28

Pfdn5, Prefoldin subunit 5, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn5Q9WU28 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pfdn5Q9WU28 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pfdn5Q9WU28 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pfdn5Q9WU28 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pfdn5Q9WU28 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pfdn5Q9WU28 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Pfdn5Q9WU28 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pfdn5Q9WU28 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pfdn5Q9WU28 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pfdn5Q9WU28 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Pfdn5Q9WU28 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pfdn5Q9WU28 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Pfdn5Q9WU28 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pfdn5Q9WU28 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pfdn5Q9WU28 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pfdn5Q9WU28 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC10.83□□□□□ -0.68
Pfdn5Q9WU28 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pfdn5Q9WU28 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC10.83□□□□□ -0.68
Pfdn5Q9WU28 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC10.83□□□□□ -0.68
Pfdn5Q9WU28 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pfdn5Q9WU28 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pfdn5Q9WU28 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn5Q9WU28 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn5Q9WU28 Gm37368-201ENSMUST00000193173 3212 ntBASIC10.82□□□□□ -0.68
Pfdn5Q9WU28 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn5Q9WU28 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn5Q9WU28 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn5Q9WU28 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn5Q9WU28 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC10.82□□□□□ -0.68
Pfdn5Q9WU28 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn5Q9WU28 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn5Q9WU28 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn5Q9WU28 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn5Q9WU28 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn5Q9WU28 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Pfdn5Q9WU28 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn5Q9WU28 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn5Q9WU28 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn5Q9WU28 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Pfdn5Q9WU28 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn5Q9WU28 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Pfdn5Q9WU28 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn5Q9WU28 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Pfdn5Q9WU28 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn5Q9WU28 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn5Q9WU28 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn5Q9WU28 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC10.82□□□□□ -0.68
Pfdn5Q9WU28 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn5Q9WU28 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn5Q9WU28 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC10.82□□□□□ -0.68
Pfdn5Q9WU28 Gm5712-201ENSMUST00000199748 1043 ntBASIC10.82□□□□□ -0.68
Pfdn5Q9WU28 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn5Q9WU28 AC154222.1-201ENSMUST00000223882 475 ntBASIC10.82□□□□□ -0.68
Pfdn5Q9WU28 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn5Q9WU28 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn5Q9WU28 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn5Q9WU28 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn5Q9WU28 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn5Q9WU28 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn5Q9WU28 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
Pfdn5Q9WU28 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn5Q9WU28 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn5Q9WU28 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC10.82□□□□□ -0.68
Pfdn5Q9WU28 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn5Q9WU28 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Pfdn5Q9WU28 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn5Q9WU28 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn5Q9WU28 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn5Q9WU28 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn5Q9WU28 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn5Q9WU28 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Pfdn5Q9WU28 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn5Q9WU28 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC10.82□□□□□ -0.68
Pfdn5Q9WU28 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn5Q9WU28 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pfdn5Q9WU28 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pfdn5Q9WU28 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pfdn5Q9WU28 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pfdn5Q9WU28 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pfdn5Q9WU28 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pfdn5Q9WU28 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Pfdn5Q9WU28 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Pfdn5Q9WU28 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pfdn5Q9WU28 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
Pfdn5Q9WU28 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
Pfdn5Q9WU28 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pfdn5Q9WU28 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pfdn5Q9WU28 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pfdn5Q9WU28 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pfdn5Q9WU28 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pfdn5Q9WU28 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pfdn5Q9WU28 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pfdn5Q9WU28 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pfdn5Q9WU28 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pfdn5Q9WU28 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Pfdn5Q9WU28 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC10.81□□□□□ -0.68
Pfdn5Q9WU28 Gm15427-201ENSMUST00000117288 531 ntBASIC10.81□□□□□ -0.68
Pfdn5Q9WU28 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC10.81□□□□□ -0.68
Pfdn5Q9WU28 Gm12017-201ENSMUST00000122453 1003 ntBASIC10.81□□□□□ -0.68
Pfdn5Q9WU28 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms