Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.18□□□□□ -0.3
Scn8aQ9WTU3 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn8aQ9WTU3 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Scn8aQ9WTU3 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn8aQ9WTU3 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Scn8aQ9WTU3 Gm12329-201ENSMUST00000120829 1007 ntBASIC13.18□□□□□ -0.3
Scn8aQ9WTU3 Gm27501-201ENSMUST00000183599 107 ntBASIC13.18□□□□□ -0.3
Scn8aQ9WTU3 Gm38341-201ENSMUST00000195357 515 ntBASIC13.18□□□□□ -0.3
Scn8aQ9WTU3 Gm43179-201ENSMUST00000198797 275 ntBASIC13.18□□□□□ -0.3
Scn8aQ9WTU3 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.18□□□□□ -0.3
Scn8aQ9WTU3 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC13.18□□□□□ -0.3
Scn8aQ9WTU3 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.18□□□□□ -0.3
Scn8aQ9WTU3 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn8aQ9WTU3 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn8aQ9WTU3 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Scn8aQ9WTU3 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn8aQ9WTU3 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Scn8aQ9WTU3 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.17□□□□□ -0.3
Scn8aQ9WTU3 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Scn8aQ9WTU3 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn8aQ9WTU3 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Scn8aQ9WTU3 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Scn8aQ9WTU3 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn8aQ9WTU3 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Scn8aQ9WTU3 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn8aQ9WTU3 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Scn8aQ9WTU3 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn8aQ9WTU3 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn8aQ9WTU3 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn8aQ9WTU3 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn8aQ9WTU3 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn8aQ9WTU3 Gm8738-201ENSMUST00000172606 329 ntBASIC13.17□□□□□ -0.3
Scn8aQ9WTU3 Gm8801-201ENSMUST00000173255 1064 ntBASIC13.17□□□□□ -0.3
Scn8aQ9WTU3 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.17□□□□□ -0.3
Scn8aQ9WTU3 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.17□□□□□ -0.3
Scn8aQ9WTU3 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Scn8aQ9WTU3 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.17□□□□□ -0.3
Scn8aQ9WTU3 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn8aQ9WTU3 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn8aQ9WTU3 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Scn8aQ9WTU3 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Scn8aQ9WTU3 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn8aQ9WTU3 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.17□□□□□ -0.3
Scn8aQ9WTU3 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn8aQ9WTU3 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Scn8aQ9WTU3 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn8aQ9WTU3 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn8aQ9WTU3 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC13.16□□□□□ -0.3
Scn8aQ9WTU3 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn8aQ9WTU3 Gm11964-201ENSMUST00000120982 444 ntBASIC13.16□□□□□ -0.3
Scn8aQ9WTU3 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn8aQ9WTU3 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC13.16□□□□□ -0.3
Scn8aQ9WTU3 Gm2991-201ENSMUST00000173338 480 ntBASIC13.16□□□□□ -0.3
Scn8aQ9WTU3 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Scn8aQ9WTU3 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.16□□□□□ -0.3
Scn8aQ9WTU3 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC13.16□□□□□ -0.3
Scn8aQ9WTU3 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC13.16□□□□□ -0.3
Scn8aQ9WTU3 Gm6013-201ENSMUST00000212264 699 ntBASIC13.16□□□□□ -0.3
Scn8aQ9WTU3 Gm45880-201ENSMUST00000213041 853 ntBASIC13.16□□□□□ -0.3
Scn8aQ9WTU3 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn8aQ9WTU3 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn8aQ9WTU3 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn8aQ9WTU3 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Scn8aQ9WTU3 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Scn8aQ9WTU3 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn8aQ9WTU3 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn8aQ9WTU3 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn8aQ9WTU3 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn8aQ9WTU3 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn8aQ9WTU3 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.16□□□□□ -0.3
Scn8aQ9WTU3 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Scn8aQ9WTU3 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Scn8aQ9WTU3 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Scn8aQ9WTU3 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Scn8aQ9WTU3 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Scn8aQ9WTU3 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC13.16□□□□□ -0.3
Scn8aQ9WTU3 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn8aQ9WTU3 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Scn8aQ9WTU3 Gm18041-201ENSMUST00000218210 618 ntBASIC13.16□□□□□ -0.3
Scn8aQ9WTU3 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn8aQ9WTU3 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn8aQ9WTU3 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.15□□□□□ -0.3
Scn8aQ9WTU3 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn8aQ9WTU3 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Scn8aQ9WTU3 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Scn8aQ9WTU3 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn8aQ9WTU3 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn8aQ9WTU3 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn8aQ9WTU3 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Scn8aQ9WTU3 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn8aQ9WTU3 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Scn8aQ9WTU3 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.15□□□□□ -0.3
Scn8aQ9WTU3 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.15□□□□□ -0.3
Scn8aQ9WTU3 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC13.15□□□□□ -0.3
Scn8aQ9WTU3 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Scn8aQ9WTU3 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC13.15□□□□□ -0.3
Scn8aQ9WTU3 Gm6621-201ENSMUST00000193251 772 ntBASIC13.15□□□□□ -0.3
Scn8aQ9WTU3 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC13.15□□□□□ -0.3
Scn8aQ9WTU3 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Scn8aQ9WTU3 Gm6334-201ENSMUST00000207083 228 ntBASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms