Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Clcf1Q9QZM3 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Clcf1Q9QZM3 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Clcf1Q9QZM3 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Clcf1Q9QZM3 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12□□□□□ -0.49
Clcf1Q9QZM3 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Clcf1Q9QZM3 Ankra2-208ENSMUST00000226100 1476 ntBASIC12□□□□□ -0.49
Clcf1Q9QZM3 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Clcf1Q9QZM3 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Clcf1Q9QZM3 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12□□□□□ -0.49
Clcf1Q9QZM3 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12□□□□□ -0.49
Clcf1Q9QZM3 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12□□□□□ -0.49
Clcf1Q9QZM3 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Clcf1Q9QZM3 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Clcf1Q9QZM3 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Clcf1Q9QZM3 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Clcf1Q9QZM3 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clcf1Q9QZM3 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.99□□□□□ -0.49
Clcf1Q9QZM3 Gm20632-201ENSMUST00000176760 2427 ntBASIC11.99□□□□□ -0.49
Clcf1Q9QZM3 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clcf1Q9QZM3 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clcf1Q9QZM3 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Clcf1Q9QZM3 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Clcf1Q9QZM3 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Clcf1Q9QZM3 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Clcf1Q9QZM3 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clcf1Q9QZM3 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Clcf1Q9QZM3 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.99□□□□□ -0.49
Clcf1Q9QZM3 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clcf1Q9QZM3 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clcf1Q9QZM3 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clcf1Q9QZM3 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Clcf1Q9QZM3 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clcf1Q9QZM3 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clcf1Q9QZM3 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clcf1Q9QZM3 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Clcf1Q9QZM3 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clcf1Q9QZM3 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clcf1Q9QZM3 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clcf1Q9QZM3 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clcf1Q9QZM3 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clcf1Q9QZM3 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Clcf1Q9QZM3 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Clcf1Q9QZM3 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clcf1Q9QZM3 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Clcf1Q9QZM3 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clcf1Q9QZM3 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Clcf1Q9QZM3 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.98□□□□□ -0.49
Clcf1Q9QZM3 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clcf1Q9QZM3 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Clcf1Q9QZM3 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clcf1Q9QZM3 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clcf1Q9QZM3 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clcf1Q9QZM3 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clcf1Q9QZM3 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clcf1Q9QZM3 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Clcf1Q9QZM3 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC11.98□□□□□ -0.49
Clcf1Q9QZM3 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Clcf1Q9QZM3 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Clcf1Q9QZM3 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clcf1Q9QZM3 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clcf1Q9QZM3 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Clcf1Q9QZM3 AC114008.2-201ENSMUST00000227699 1347 ntBASIC11.98□□□□□ -0.49
Clcf1Q9QZM3 Gm12390-201ENSMUST00000117897 397 ntBASIC11.98□□□□□ -0.49
Clcf1Q9QZM3 Gm12537-201ENSMUST00000119266 1002 ntBASIC11.98□□□□□ -0.49
Clcf1Q9QZM3 Gm12070-201ENSMUST00000119551 1002 ntBASIC11.98□□□□□ -0.49
Clcf1Q9QZM3 Gm12671-201ENSMUST00000119978 1002 ntBASIC11.98□□□□□ -0.49
Clcf1Q9QZM3 Gm13292-201ENSMUST00000120014 1000 ntBASIC11.98□□□□□ -0.49
Clcf1Q9QZM3 Gm12403-201ENSMUST00000121384 959 ntBASIC11.98□□□□□ -0.49
Clcf1Q9QZM3 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC11.98□□□□□ -0.49
Clcf1Q9QZM3 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clcf1Q9QZM3 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.98□□□□□ -0.49
Clcf1Q9QZM3 Gm10359-201ENSMUST00000180167 1002 ntBASIC11.98□□□□□ -0.49
Clcf1Q9QZM3 Gm12033-201ENSMUST00000180654 1002 ntBASIC11.98□□□□□ -0.49
Clcf1Q9QZM3 Gm5559-201ENSMUST00000180755 1002 ntBASIC11.98□□□□□ -0.49
Clcf1Q9QZM3 Gm8652-201ENSMUST00000181363 964 ntBASIC11.98□□□□□ -0.49
Clcf1Q9QZM3 Gm4335-201ENSMUST00000182581 1004 ntBASIC11.98□□□□□ -0.49
Clcf1Q9QZM3 Gm29608-201ENSMUST00000190444 463 ntBASIC11.98□□□□□ -0.49
Clcf1Q9QZM3 Gm38144-201ENSMUST00000192790 465 ntBASIC11.98□□□□□ -0.49
Clcf1Q9QZM3 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Clcf1Q9QZM3 Gm38671-201ENSMUST00000200573 130 ntBASIC11.98□□□□□ -0.49
Clcf1Q9QZM3 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC11.98□□□□□ -0.49
Clcf1Q9QZM3 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC11.98□□□□□ -0.49
Clcf1Q9QZM3 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Clcf1Q9QZM3 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC11.98□□□□□ -0.49
Clcf1Q9QZM3 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clcf1Q9QZM3 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clcf1Q9QZM3 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clcf1Q9QZM3 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clcf1Q9QZM3 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clcf1Q9QZM3 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clcf1Q9QZM3 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Clcf1Q9QZM3 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clcf1Q9QZM3 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC11.98□□□□□ -0.49
Clcf1Q9QZM3 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.98□□□□□ -0.49
Clcf1Q9QZM3 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Clcf1Q9QZM3 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Clcf1Q9QZM3 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clcf1Q9QZM3 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Clcf1Q9QZM3 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms