Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trem1Q9JKE2 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC11.81□□□□□ -0.52
Trem1Q9JKE2 Gm16198-201ENSMUST00000118766 670 ntBASIC11.81□□□□□ -0.52
Trem1Q9JKE2 Gm6184-201ENSMUST00000120403 1261 ntBASIC11.81□□□□□ -0.52
Trem1Q9JKE2 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trem1Q9JKE2 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC11.81□□□□□ -0.52
Trem1Q9JKE2 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trem1Q9JKE2 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC11.81□□□□□ -0.52
Trem1Q9JKE2 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trem1Q9JKE2 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trem1Q9JKE2 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trem1Q9JKE2 Rps4l-201ENSMUST00000071745 943 ntBASIC11.81□□□□□ -0.52
Trem1Q9JKE2 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trem1Q9JKE2 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trem1Q9JKE2 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trem1Q9JKE2 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trem1Q9JKE2 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trem1Q9JKE2 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Trem1Q9JKE2 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trem1Q9JKE2 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trem1Q9JKE2 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trem1Q9JKE2 Gm45643-201ENSMUST00000211364 1484 ntBASIC11.81□□□□□ -0.52
Trem1Q9JKE2 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.81□□□□□ -0.52
Trem1Q9JKE2 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Trem1Q9JKE2 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.81□□□□□ -0.52
Trem1Q9JKE2 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trem1Q9JKE2 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.81□□□□□ -0.52
Trem1Q9JKE2 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC11.81□□□□□ -0.52
Trem1Q9JKE2 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trem1Q9JKE2 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trem1Q9JKE2 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC11.81□□□□□ -0.52
Trem1Q9JKE2 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trem1Q9JKE2 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trem1Q9JKE2 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trem1Q9JKE2 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trem1Q9JKE2 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.8□□□□□ -0.52
Trem1Q9JKE2 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trem1Q9JKE2 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trem1Q9JKE2 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trem1Q9JKE2 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trem1Q9JKE2 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trem1Q9JKE2 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trem1Q9JKE2 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trem1Q9JKE2 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Trem1Q9JKE2 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trem1Q9JKE2 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trem1Q9JKE2 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trem1Q9JKE2 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Trem1Q9JKE2 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trem1Q9JKE2 Gm7862-201ENSMUST00000121461 292 ntBASIC11.8□□□□□ -0.52
Trem1Q9JKE2 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trem1Q9JKE2 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trem1Q9JKE2 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC11.8□□□□□ -0.52
Trem1Q9JKE2 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC11.8□□□□□ -0.52
Trem1Q9JKE2 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC11.8□□□□□ -0.52
Trem1Q9JKE2 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC11.8□□□□□ -0.52
Trem1Q9JKE2 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC11.8□□□□□ -0.52
Trem1Q9JKE2 AV026068-213ENSMUST00000223675 1171 ntBASIC11.8□□□□□ -0.52
Trem1Q9JKE2 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trem1Q9JKE2 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trem1Q9JKE2 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trem1Q9JKE2 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trem1Q9JKE2 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trem1Q9JKE2 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trem1Q9JKE2 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trem1Q9JKE2 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trem1Q9JKE2 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.8□□□□□ -0.52
Trem1Q9JKE2 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trem1Q9JKE2 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trem1Q9JKE2 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trem1Q9JKE2 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trem1Q9JKE2 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trem1Q9JKE2 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trem1Q9JKE2 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.8□□□□□ -0.52
Trem1Q9JKE2 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trem1Q9JKE2 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trem1Q9JKE2 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trem1Q9JKE2 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.79□□□□□ -0.52
Trem1Q9JKE2 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trem1Q9JKE2 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.79□□□□□ -0.52
Trem1Q9JKE2 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trem1Q9JKE2 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trem1Q9JKE2 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trem1Q9JKE2 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trem1Q9JKE2 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trem1Q9JKE2 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trem1Q9JKE2 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trem1Q9JKE2 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trem1Q9JKE2 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trem1Q9JKE2 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trem1Q9JKE2 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trem1Q9JKE2 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trem1Q9JKE2 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trem1Q9JKE2 Gm13036-201ENSMUST00000117799 748 ntBASIC11.79□□□□□ -0.52
Trem1Q9JKE2 Gm11452-201ENSMUST00000122376 690 ntBASIC11.79□□□□□ -0.52
Trem1Q9JKE2 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC11.79□□□□□ -0.52
Trem1Q9JKE2 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC11.79□□□□□ -0.52
Trem1Q9JKE2 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC11.79□□□□□ -0.52
Trem1Q9JKE2 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC11.79□□□□□ -0.52
Trem1Q9JKE2 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms