Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Smco4Q9JIS3 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smco4Q9JIS3 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Smco4Q9JIS3 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smco4Q9JIS3 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC10.53□□□□□ -0.72
Smco4Q9JIS3 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smco4Q9JIS3 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Smco4Q9JIS3 AC124433.1-202ENSMUST00000224762 1535 ntBASIC10.53□□□□□ -0.72
Smco4Q9JIS3 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smco4Q9JIS3 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smco4Q9JIS3 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smco4Q9JIS3 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smco4Q9JIS3 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smco4Q9JIS3 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Smco4Q9JIS3 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smco4Q9JIS3 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Smco4Q9JIS3 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smco4Q9JIS3 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Smco4Q9JIS3 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Smco4Q9JIS3 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smco4Q9JIS3 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smco4Q9JIS3 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Smco4Q9JIS3 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Smco4Q9JIS3 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smco4Q9JIS3 Gm9682-201ENSMUST00000197505 556 ntBASIC10.53□□□□□ -0.72
Smco4Q9JIS3 Gm43332-201ENSMUST00000202511 1044 ntBASIC10.53□□□□□ -0.72
Smco4Q9JIS3 Gm44124-201ENSMUST00000204159 472 ntBASIC10.53□□□□□ -0.72
Smco4Q9JIS3 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Smco4Q9JIS3 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smco4Q9JIS3 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smco4Q9JIS3 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Smco4Q9JIS3 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smco4Q9JIS3 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Smco4Q9JIS3 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smco4Q9JIS3 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC10.53□□□□□ -0.72
Smco4Q9JIS3 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smco4Q9JIS3 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smco4Q9JIS3 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smco4Q9JIS3 Gm43860-201ENSMUST00000201742 2705 ntBASIC10.53□□□□□ -0.72
Smco4Q9JIS3 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smco4Q9JIS3 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Smco4Q9JIS3 Gm3052-202ENSMUST00000188254 2224 ntBASIC10.53□□□□□ -0.72
Smco4Q9JIS3 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smco4Q9JIS3 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smco4Q9JIS3 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Smco4Q9JIS3 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smco4Q9JIS3 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Smco4Q9JIS3 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC10.52□□□□□ -0.72
Smco4Q9JIS3 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC10.52□□□□□ -0.72
Smco4Q9JIS3 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Smco4Q9JIS3 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC10.52□□□□□ -0.72
Smco4Q9JIS3 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Smco4Q9JIS3 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Smco4Q9JIS3 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Smco4Q9JIS3 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Smco4Q9JIS3 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Smco4Q9JIS3 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smco4Q9JIS3 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC10.52□□□□□ -0.73
Smco4Q9JIS3 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smco4Q9JIS3 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Smco4Q9JIS3 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smco4Q9JIS3 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smco4Q9JIS3 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smco4Q9JIS3 AC154639.1-201ENSMUST00000224393 2849 ntBASIC10.52□□□□□ -0.73
Smco4Q9JIS3 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smco4Q9JIS3 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Smco4Q9JIS3 Gm15678-201ENSMUST00000117573 960 ntBASIC10.52□□□□□ -0.73
Smco4Q9JIS3 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC10.52□□□□□ -0.73
Smco4Q9JIS3 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC10.52□□□□□ -0.73
Smco4Q9JIS3 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Smco4Q9JIS3 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smco4Q9JIS3 Gm2308-201ENSMUST00000166539 1004 ntBASIC10.52□□□□□ -0.73
Smco4Q9JIS3 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Smco4Q9JIS3 Gm37153-201ENSMUST00000193637 231 ntBASIC10.52□□□□□ -0.73
Smco4Q9JIS3 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Smco4Q9JIS3 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Smco4Q9JIS3 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC10.52□□□□□ -0.73
Smco4Q9JIS3 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smco4Q9JIS3 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC10.52□□□□□ -0.73
Smco4Q9JIS3 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC10.52□□□□□ -0.73
Smco4Q9JIS3 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smco4Q9JIS3 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smco4Q9JIS3 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smco4Q9JIS3 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smco4Q9JIS3 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smco4Q9JIS3 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
Smco4Q9JIS3 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Smco4Q9JIS3 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smco4Q9JIS3 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smco4Q9JIS3 Ptprm-203ENSMUST00000224091 3773 ntBASIC10.52□□□□□ -0.73
Smco4Q9JIS3 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC10.52□□□□□ -0.73
Smco4Q9JIS3 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smco4Q9JIS3 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smco4Q9JIS3 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC10.52□□□□□ -0.73
Smco4Q9JIS3 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smco4Q9JIS3 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smco4Q9JIS3 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smco4Q9JIS3 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Smco4Q9JIS3 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smco4Q9JIS3 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms