Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC17.98■□□□□ 0.47
Cpsf1Q9EPU4 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cpsf1Q9EPU4 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cpsf1Q9EPU4 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC17.98■□□□□ 0.47
Cpsf1Q9EPU4 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cpsf1Q9EPU4 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC17.98■□□□□ 0.47
Cpsf1Q9EPU4 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Cpsf1Q9EPU4 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cpsf1Q9EPU4 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Cpsf1Q9EPU4 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cpsf1Q9EPU4 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.98■□□□□ 0.47
Cpsf1Q9EPU4 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cpsf1Q9EPU4 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cpsf1Q9EPU4 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cpsf1Q9EPU4 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cpsf1Q9EPU4 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cpsf1Q9EPU4 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cpsf1Q9EPU4 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cpsf1Q9EPU4 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
Cpsf1Q9EPU4 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC17.98■□□□□ 0.47
Cpsf1Q9EPU4 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cpsf1Q9EPU4 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cpsf1Q9EPU4 Gm37489-201ENSMUST00000191883 159 ntBASIC17.98■□□□□ 0.47
Cpsf1Q9EPU4 Ighv1-62-201ENSMUST00000193406 350 ntBASIC17.98■□□□□ 0.47
Cpsf1Q9EPU4 AC093022.5-201ENSMUST00000226841 1079 ntBASIC17.98■□□□□ 0.47
Cpsf1Q9EPU4 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Cpsf1Q9EPU4 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cpsf1Q9EPU4 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cpsf1Q9EPU4 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cpsf1Q9EPU4 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cpsf1Q9EPU4 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC17.97■□□□□ 0.47
Cpsf1Q9EPU4 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cpsf1Q9EPU4 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Cpsf1Q9EPU4 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cpsf1Q9EPU4 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
Cpsf1Q9EPU4 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cpsf1Q9EPU4 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cpsf1Q9EPU4 Gm12749-201ENSMUST00000122138 1159 ntBASIC17.97■□□□□ 0.47
Cpsf1Q9EPU4 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cpsf1Q9EPU4 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC17.97■□□□□ 0.47
Cpsf1Q9EPU4 Gm38000-201ENSMUST00000192390 1215 ntBASIC17.97■□□□□ 0.47
Cpsf1Q9EPU4 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cpsf1Q9EPU4 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cpsf1Q9EPU4 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cpsf1Q9EPU4 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Cpsf1Q9EPU4 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC17.96■□□□□ 0.47
Cpsf1Q9EPU4 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cpsf1Q9EPU4 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cpsf1Q9EPU4 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC17.96■□□□□ 0.47
Cpsf1Q9EPU4 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cpsf1Q9EPU4 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cpsf1Q9EPU4 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cpsf1Q9EPU4 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cpsf1Q9EPU4 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cpsf1Q9EPU4 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
Cpsf1Q9EPU4 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cpsf1Q9EPU4 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cpsf1Q9EPU4 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Cpsf1Q9EPU4 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cpsf1Q9EPU4 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC17.96■□□□□ 0.47
Cpsf1Q9EPU4 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC17.96■□□□□ 0.47
Cpsf1Q9EPU4 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC17.96■□□□□ 0.47
Cpsf1Q9EPU4 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC17.96■□□□□ 0.47
Cpsf1Q9EPU4 Gm17376-201ENSMUST00000166016 84 ntBASIC17.96■□□□□ 0.47
Cpsf1Q9EPU4 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC17.96■□□□□ 0.47
Cpsf1Q9EPU4 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
Cpsf1Q9EPU4 AC154305.4-201ENSMUST00000224520 614 ntBASIC17.96■□□□□ 0.47
Cpsf1Q9EPU4 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cpsf1Q9EPU4 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cpsf1Q9EPU4 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cpsf1Q9EPU4 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC17.96■□□□□ 0.47
Cpsf1Q9EPU4 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Cpsf1Q9EPU4 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC17.95■□□□□ 0.46
Cpsf1Q9EPU4 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Cpsf1Q9EPU4 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cpsf1Q9EPU4 Grk6-205ENSMUST00000224653 2976 ntBASIC17.95■□□□□ 0.46
Cpsf1Q9EPU4 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cpsf1Q9EPU4 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cpsf1Q9EPU4 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Cpsf1Q9EPU4 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cpsf1Q9EPU4 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cpsf1Q9EPU4 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
Cpsf1Q9EPU4 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Cpsf1Q9EPU4 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Cpsf1Q9EPU4 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cpsf1Q9EPU4 Gm20482-202ENSMUST00000174729 825 ntBASIC17.95■□□□□ 0.46
Cpsf1Q9EPU4 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cpsf1Q9EPU4 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cpsf1Q9EPU4 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cpsf1Q9EPU4 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cpsf1Q9EPU4 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cpsf1Q9EPU4 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cpsf1Q9EPU4 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cpsf1Q9EPU4 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cpsf1Q9EPU4 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Cpsf1Q9EPU4 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cpsf1Q9EPU4 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cpsf1Q9EPU4 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cpsf1Q9EPU4 AC167669.2-201ENSMUST00000224417 1620 ntBASIC17.94■□□□□ 0.46
Cpsf1Q9EPU4 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms