Protein–RNA interactions for Protein: Q9D7V1

Sh2d4a, SH2 domain-containing protein 4A, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4aQ9D7V1 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sh2d4aQ9D7V1 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sh2d4aQ9D7V1 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sh2d4aQ9D7V1 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sh2d4aQ9D7V1 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sh2d4aQ9D7V1 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Sh2d4aQ9D7V1 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sh2d4aQ9D7V1 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sh2d4aQ9D7V1 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Sh2d4aQ9D7V1 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sh2d4aQ9D7V1 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sh2d4aQ9D7V1 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sh2d4aQ9D7V1 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Sh2d4aQ9D7V1 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sh2d4aQ9D7V1 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.82□□□□□ -0.36
Sh2d4aQ9D7V1 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sh2d4aQ9D7V1 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Sh2d4aQ9D7V1 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.82□□□□□ -0.36
Sh2d4aQ9D7V1 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sh2d4aQ9D7V1 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Sh2d4aQ9D7V1 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sh2d4aQ9D7V1 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sh2d4aQ9D7V1 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sh2d4aQ9D7V1 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Sh2d4aQ9D7V1 Gm6912-201ENSMUST00000117218 544 ntBASIC12.82□□□□□ -0.36
Sh2d4aQ9D7V1 Gm11594-201ENSMUST00000122313 162 ntBASIC12.82□□□□□ -0.36
Sh2d4aQ9D7V1 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Sh2d4aQ9D7V1 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sh2d4aQ9D7V1 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Sh2d4aQ9D7V1 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.82□□□□□ -0.36
Sh2d4aQ9D7V1 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Sh2d4aQ9D7V1 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sh2d4aQ9D7V1 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sh2d4aQ9D7V1 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sh2d4aQ9D7V1 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sh2d4aQ9D7V1 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sh2d4aQ9D7V1 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sh2d4aQ9D7V1 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Sh2d4aQ9D7V1 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.82□□□□□ -0.36
Sh2d4aQ9D7V1 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Sh2d4aQ9D7V1 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.82□□□□□ -0.36
Sh2d4aQ9D7V1 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.82□□□□□ -0.36
Sh2d4aQ9D7V1 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sh2d4aQ9D7V1 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Sh2d4aQ9D7V1 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sh2d4aQ9D7V1 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sh2d4aQ9D7V1 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sh2d4aQ9D7V1 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sh2d4aQ9D7V1 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Sh2d4aQ9D7V1 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sh2d4aQ9D7V1 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sh2d4aQ9D7V1 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sh2d4aQ9D7V1 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sh2d4aQ9D7V1 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.81□□□□□ -0.36
Sh2d4aQ9D7V1 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sh2d4aQ9D7V1 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sh2d4aQ9D7V1 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sh2d4aQ9D7V1 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sh2d4aQ9D7V1 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sh2d4aQ9D7V1 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sh2d4aQ9D7V1 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sh2d4aQ9D7V1 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Sh2d4aQ9D7V1 Gm12585-201ENSMUST00000117307 290 ntBASIC12.81□□□□□ -0.36
Sh2d4aQ9D7V1 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.81□□□□□ -0.36
Sh2d4aQ9D7V1 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12.81□□□□□ -0.36
Sh2d4aQ9D7V1 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sh2d4aQ9D7V1 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sh2d4aQ9D7V1 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC12.81□□□□□ -0.36
Sh2d4aQ9D7V1 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.81□□□□□ -0.36
Sh2d4aQ9D7V1 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Sh2d4aQ9D7V1 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.81□□□□□ -0.36
Sh2d4aQ9D7V1 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sh2d4aQ9D7V1 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sh2d4aQ9D7V1 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sh2d4aQ9D7V1 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.81□□□□□ -0.36
Sh2d4aQ9D7V1 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sh2d4aQ9D7V1 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sh2d4aQ9D7V1 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sh2d4aQ9D7V1 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sh2d4aQ9D7V1 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sh2d4aQ9D7V1 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sh2d4aQ9D7V1 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sh2d4aQ9D7V1 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.81□□□□□ -0.36
Sh2d4aQ9D7V1 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sh2d4aQ9D7V1 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sh2d4aQ9D7V1 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sh2d4aQ9D7V1 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sh2d4aQ9D7V1 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sh2d4aQ9D7V1 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sh2d4aQ9D7V1 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sh2d4aQ9D7V1 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sh2d4aQ9D7V1 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Sh2d4aQ9D7V1 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sh2d4aQ9D7V1 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.8□□□□□ -0.36
Sh2d4aQ9D7V1 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sh2d4aQ9D7V1 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.8□□□□□ -0.36
Sh2d4aQ9D7V1 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.8□□□□□ -0.36
Sh2d4aQ9D7V1 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sh2d4aQ9D7V1 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.8□□□□□ -0.36
Sh2d4aQ9D7V1 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms