Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp5Q9D7S9 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp5Q9D7S9 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp5Q9D7S9 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp5Q9D7S9 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp5Q9D7S9 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Chmp5Q9D7S9 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC16.5■□□□□ 0.23
Chmp5Q9D7S9 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Chmp5Q9D7S9 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp5Q9D7S9 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC16.5■□□□□ 0.23
Chmp5Q9D7S9 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp5Q9D7S9 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp5Q9D7S9 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp5Q9D7S9 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp5Q9D7S9 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Chmp5Q9D7S9 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Chmp5Q9D7S9 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp5Q9D7S9 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp5Q9D7S9 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp5Q9D7S9 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp5Q9D7S9 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp5Q9D7S9 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp5Q9D7S9 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp5Q9D7S9 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
Chmp5Q9D7S9 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC16.5■□□□□ 0.23
Chmp5Q9D7S9 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC16.5■□□□□ 0.23
Chmp5Q9D7S9 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC16.5■□□□□ 0.23
Chmp5Q9D7S9 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Chmp5Q9D7S9 Gm17870-201ENSMUST00000219489 1174 ntBASIC16.5■□□□□ 0.23
Chmp5Q9D7S9 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp5Q9D7S9 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Chmp5Q9D7S9 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp5Q9D7S9 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp5Q9D7S9 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC16.5■□□□□ 0.23
Chmp5Q9D7S9 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp5Q9D7S9 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp5Q9D7S9 Gm45743-201ENSMUST00000212701 2795 ntBASIC16.5■□□□□ 0.23
Chmp5Q9D7S9 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp5Q9D7S9 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp5Q9D7S9 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp5Q9D7S9 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp5Q9D7S9 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp5Q9D7S9 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp5Q9D7S9 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp5Q9D7S9 Gm42748-201ENSMUST00000199354 2341 ntBASIC16.5■□□□□ 0.23
Chmp5Q9D7S9 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp5Q9D7S9 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp5Q9D7S9 Gm8798-201ENSMUST00000211877 1661 ntBASIC16.5■□□□□ 0.23
Chmp5Q9D7S9 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp5Q9D7S9 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC16.49■□□□□ 0.23
Chmp5Q9D7S9 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp5Q9D7S9 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Chmp5Q9D7S9 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Chmp5Q9D7S9 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC16.49■□□□□ 0.23
Chmp5Q9D7S9 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp5Q9D7S9 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp5Q9D7S9 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Chmp5Q9D7S9 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC16.49■□□□□ 0.23
Chmp5Q9D7S9 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp5Q9D7S9 Gm4875-201ENSMUST00000118257 786 ntBASIC16.49■□□□□ 0.23
Chmp5Q9D7S9 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC16.49■□□□□ 0.23
Chmp5Q9D7S9 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp5Q9D7S9 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Chmp5Q9D7S9 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp5Q9D7S9 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC16.49■□□□□ 0.23
Chmp5Q9D7S9 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC16.49■□□□□ 0.23
Chmp5Q9D7S9 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Chmp5Q9D7S9 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp5Q9D7S9 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp5Q9D7S9 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp5Q9D7S9 Gm2756-201ENSMUST00000195851 400 ntBASIC16.49■□□□□ 0.23
Chmp5Q9D7S9 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp5Q9D7S9 Gm17795-201ENSMUST00000214505 757 ntBASIC16.49■□□□□ 0.23
Chmp5Q9D7S9 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
Chmp5Q9D7S9 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp5Q9D7S9 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp5Q9D7S9 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp5Q9D7S9 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp5Q9D7S9 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp5Q9D7S9 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp5Q9D7S9 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp5Q9D7S9 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp5Q9D7S9 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp5Q9D7S9 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp5Q9D7S9 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp5Q9D7S9 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp5Q9D7S9 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp5Q9D7S9 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp5Q9D7S9 Fgf17-202ENSMUST00000227123 1336 ntBASIC16.48■□□□□ 0.23
Chmp5Q9D7S9 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp5Q9D7S9 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp5Q9D7S9 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp5Q9D7S9 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp5Q9D7S9 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC16.48■□□□□ 0.23
Chmp5Q9D7S9 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp5Q9D7S9 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Chmp5Q9D7S9 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC16.48■□□□□ 0.23
Chmp5Q9D7S9 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp5Q9D7S9 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp5Q9D7S9 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms