Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tmem54Q9D7S1 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tmem54Q9D7S1 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tmem54Q9D7S1 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Tmem54Q9D7S1 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Tmem54Q9D7S1 Gm13050-201ENSMUST00000122149 1345 ntBASIC11.57□□□□□ -0.56
Tmem54Q9D7S1 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tmem54Q9D7S1 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Tmem54Q9D7S1 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.57□□□□□ -0.56
Tmem54Q9D7S1 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.57□□□□□ -0.56
Tmem54Q9D7S1 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tmem54Q9D7S1 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.57□□□□□ -0.56
Tmem54Q9D7S1 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.56□□□□□ -0.56
Tmem54Q9D7S1 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Tmem54Q9D7S1 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tmem54Q9D7S1 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tmem54Q9D7S1 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Tmem54Q9D7S1 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Tmem54Q9D7S1 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Tmem54Q9D7S1 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Tmem54Q9D7S1 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Tmem54Q9D7S1 AC153366.2-201ENSMUST00000219461 1984 ntBASIC11.56□□□□□ -0.56
Tmem54Q9D7S1 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tmem54Q9D7S1 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Tmem54Q9D7S1 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tmem54Q9D7S1 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tmem54Q9D7S1 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tmem54Q9D7S1 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tmem54Q9D7S1 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.56□□□□□ -0.56
Tmem54Q9D7S1 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Tmem54Q9D7S1 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC11.56□□□□□ -0.56
Tmem54Q9D7S1 Gm27847-201ENSMUST00000183711 107 ntBASIC11.56□□□□□ -0.56
Tmem54Q9D7S1 Gm27375-201ENSMUST00000183799 107 ntBASIC11.56□□□□□ -0.56
Tmem54Q9D7S1 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Tmem54Q9D7S1 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.56□□□□□ -0.56
Tmem54Q9D7S1 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC11.56□□□□□ -0.56
Tmem54Q9D7S1 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.56□□□□□ -0.56
Tmem54Q9D7S1 AC130829.1-201ENSMUST00000221548 494 ntBASIC11.56□□□□□ -0.56
Tmem54Q9D7S1 AC154276.1-201ENSMUST00000228874 1299 ntBASIC11.56□□□□□ -0.56
Tmem54Q9D7S1 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Tmem54Q9D7S1 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tmem54Q9D7S1 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Tmem54Q9D7S1 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tmem54Q9D7S1 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tmem54Q9D7S1 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tmem54Q9D7S1 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tmem54Q9D7S1 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tmem54Q9D7S1 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Tmem54Q9D7S1 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC11.56□□□□□ -0.56
Tmem54Q9D7S1 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tmem54Q9D7S1 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Tmem54Q9D7S1 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tmem54Q9D7S1 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.56□□□□□ -0.56
Tmem54Q9D7S1 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.56□□□□□ -0.56
Tmem54Q9D7S1 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tmem54Q9D7S1 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tmem54Q9D7S1 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tmem54Q9D7S1 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC11.56□□□□□ -0.56
Tmem54Q9D7S1 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tmem54Q9D7S1 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.56□□□□□ -0.56
Tmem54Q9D7S1 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC11.56□□□□□ -0.56
Tmem54Q9D7S1 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Tmem54Q9D7S1 Gm38346-201ENSMUST00000192379 2639 ntBASIC11.56□□□□□ -0.56
Tmem54Q9D7S1 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Tmem54Q9D7S1 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tmem54Q9D7S1 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tmem54Q9D7S1 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tmem54Q9D7S1 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Tmem54Q9D7S1 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tmem54Q9D7S1 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Tmem54Q9D7S1 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tmem54Q9D7S1 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Tmem54Q9D7S1 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tmem54Q9D7S1 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.55□□□□□ -0.56
Tmem54Q9D7S1 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tmem54Q9D7S1 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tmem54Q9D7S1 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tmem54Q9D7S1 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Tmem54Q9D7S1 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.55□□□□□ -0.56
Tmem54Q9D7S1 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Tmem54Q9D7S1 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tmem54Q9D7S1 Gm11618-201ENSMUST00000117946 267 ntBASIC11.55□□□□□ -0.56
Tmem54Q9D7S1 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.55□□□□□ -0.56
Tmem54Q9D7S1 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Tmem54Q9D7S1 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Tmem54Q9D7S1 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tmem54Q9D7S1 Gm37748-201ENSMUST00000194379 1140 ntBASIC11.55□□□□□ -0.56
Tmem54Q9D7S1 Gm19931-201ENSMUST00000198920 368 ntBASIC11.55□□□□□ -0.56
Tmem54Q9D7S1 Gm7561-201ENSMUST00000211203 886 ntBASIC11.55□□□□□ -0.56
Tmem54Q9D7S1 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Tmem54Q9D7S1 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.55□□□□□ -0.56
Tmem54Q9D7S1 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.55□□□□□ -0.56
Tmem54Q9D7S1 Kcnk16-202ENSMUST00000225596 2127 ntBASIC11.55□□□□□ -0.56
Tmem54Q9D7S1 AC132467.2-202ENSMUST00000227726 559 ntBASIC11.55□□□□□ -0.56
Tmem54Q9D7S1 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Tmem54Q9D7S1 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Tmem54Q9D7S1 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Tmem54Q9D7S1 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.55□□□□□ -0.56
Tmem54Q9D7S1 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tmem54Q9D7S1 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms