Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim42Q9D2H5 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim42Q9D2H5 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trim42Q9D2H5 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.22□□□□□ -0.29
Trim42Q9D2H5 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.22□□□□□ -0.29
Trim42Q9D2H5 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim42Q9D2H5 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim42Q9D2H5 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim42Q9D2H5 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim42Q9D2H5 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim42Q9D2H5 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.22□□□□□ -0.29
Trim42Q9D2H5 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim42Q9D2H5 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim42Q9D2H5 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim42Q9D2H5 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim42Q9D2H5 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.22□□□□□ -0.29
Trim42Q9D2H5 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.22□□□□□ -0.29
Trim42Q9D2H5 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.22□□□□□ -0.29
Trim42Q9D2H5 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trim42Q9D2H5 AW822252-206ENSMUST00000208904 237 ntBASIC13.22□□□□□ -0.29
Trim42Q9D2H5 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.22□□□□□ -0.29
Trim42Q9D2H5 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim42Q9D2H5 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim42Q9D2H5 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim42Q9D2H5 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim42Q9D2H5 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim42Q9D2H5 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim42Q9D2H5 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim42Q9D2H5 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim42Q9D2H5 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim42Q9D2H5 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim42Q9D2H5 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim42Q9D2H5 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim42Q9D2H5 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim42Q9D2H5 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim42Q9D2H5 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Trim42Q9D2H5 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.22□□□□□ -0.29
Trim42Q9D2H5 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim42Q9D2H5 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.22□□□□□ -0.29
Trim42Q9D2H5 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim42Q9D2H5 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim42Q9D2H5 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim42Q9D2H5 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trim42Q9D2H5 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim42Q9D2H5 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.22□□□□□ -0.29
Trim42Q9D2H5 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim42Q9D2H5 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim42Q9D2H5 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim42Q9D2H5 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim42Q9D2H5 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.21□□□□□ -0.29
Trim42Q9D2H5 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Trim42Q9D2H5 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
Trim42Q9D2H5 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim42Q9D2H5 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim42Q9D2H5 AC124577.2-201ENSMUST00000217413 2420 ntBASIC13.21□□□□□ -0.29
Trim42Q9D2H5 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim42Q9D2H5 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim42Q9D2H5 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim42Q9D2H5 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim42Q9D2H5 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trim42Q9D2H5 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim42Q9D2H5 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim42Q9D2H5 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.21□□□□□ -0.29
Trim42Q9D2H5 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.21□□□□□ -0.29
Trim42Q9D2H5 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim42Q9D2H5 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC13.21□□□□□ -0.29
Trim42Q9D2H5 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.21□□□□□ -0.29
Trim42Q9D2H5 Gm45612-201ENSMUST00000211320 160 ntBASIC13.21□□□□□ -0.29
Trim42Q9D2H5 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim42Q9D2H5 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.21□□□□□ -0.29
Trim42Q9D2H5 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Trim42Q9D2H5 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim42Q9D2H5 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim42Q9D2H5 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim42Q9D2H5 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim42Q9D2H5 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trim42Q9D2H5 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trim42Q9D2H5 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.3
Trim42Q9D2H5 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trim42Q9D2H5 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim42Q9D2H5 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim42Q9D2H5 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim42Q9D2H5 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trim42Q9D2H5 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.2□□□□□ -0.3
Trim42Q9D2H5 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim42Q9D2H5 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim42Q9D2H5 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim42Q9D2H5 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim42Q9D2H5 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim42Q9D2H5 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trim42Q9D2H5 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim42Q9D2H5 Gm13722-201ENSMUST00000117964 3066 ntBASIC13.2□□□□□ -0.3
Trim42Q9D2H5 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Trim42Q9D2H5 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Trim42Q9D2H5 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim42Q9D2H5 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim42Q9D2H5 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim42Q9D2H5 Gm5566-201ENSMUST00000116118 459 ntBASIC13.2□□□□□ -0.3
Trim42Q9D2H5 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trim42Q9D2H5 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms