Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim13Q9CYB0 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim13Q9CYB0 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim13Q9CYB0 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim13Q9CYB0 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim13Q9CYB0 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim13Q9CYB0 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim13Q9CYB0 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim13Q9CYB0 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.2□□□□□ -0.46
Trim13Q9CYB0 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim13Q9CYB0 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trim13Q9CYB0 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim13Q9CYB0 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trim13Q9CYB0 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim13Q9CYB0 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim13Q9CYB0 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim13Q9CYB0 Gm13385-201ENSMUST00000121089 220 ntBASIC12.2□□□□□ -0.46
Trim13Q9CYB0 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim13Q9CYB0 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Trim13Q9CYB0 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC12.2□□□□□ -0.46
Trim13Q9CYB0 Gm26308-201ENSMUST00000157768 69 ntBASIC12.2□□□□□ -0.46
Trim13Q9CYB0 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC12.2□□□□□ -0.46
Trim13Q9CYB0 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC12.2□□□□□ -0.46
Trim13Q9CYB0 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trim13Q9CYB0 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.2□□□□□ -0.46
Trim13Q9CYB0 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trim13Q9CYB0 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim13Q9CYB0 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim13Q9CYB0 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim13Q9CYB0 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim13Q9CYB0 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trim13Q9CYB0 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim13Q9CYB0 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim13Q9CYB0 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim13Q9CYB0 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.2□□□□□ -0.46
Trim13Q9CYB0 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim13Q9CYB0 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim13Q9CYB0 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim13Q9CYB0 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.2□□□□□ -0.46
Trim13Q9CYB0 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Trim13Q9CYB0 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trim13Q9CYB0 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim13Q9CYB0 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim13Q9CYB0 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim13Q9CYB0 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim13Q9CYB0 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim13Q9CYB0 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim13Q9CYB0 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Trim13Q9CYB0 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim13Q9CYB0 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim13Q9CYB0 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim13Q9CYB0 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim13Q9CYB0 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim13Q9CYB0 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim13Q9CYB0 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim13Q9CYB0 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim13Q9CYB0 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim13Q9CYB0 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim13Q9CYB0 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim13Q9CYB0 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim13Q9CYB0 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim13Q9CYB0 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Trim13Q9CYB0 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim13Q9CYB0 Gm24543-201ENSMUST00000103867 82 ntBASIC12.19□□□□□ -0.46
Trim13Q9CYB0 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trim13Q9CYB0 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC12.19□□□□□ -0.46
Trim13Q9CYB0 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trim13Q9CYB0 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trim13Q9CYB0 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trim13Q9CYB0 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim13Q9CYB0 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Trim13Q9CYB0 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.19□□□□□ -0.46
Trim13Q9CYB0 Mir6990-201ENSMUST00000183724 91 ntBASIC12.19□□□□□ -0.46
Trim13Q9CYB0 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.19□□□□□ -0.46
Trim13Q9CYB0 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trim13Q9CYB0 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Trim13Q9CYB0 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim13Q9CYB0 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim13Q9CYB0 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trim13Q9CYB0 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim13Q9CYB0 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim13Q9CYB0 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim13Q9CYB0 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trim13Q9CYB0 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim13Q9CYB0 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim13Q9CYB0 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim13Q9CYB0 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim13Q9CYB0 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.19□□□□□ -0.46
Trim13Q9CYB0 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim13Q9CYB0 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trim13Q9CYB0 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim13Q9CYB0 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.18□□□□□ -0.46
Trim13Q9CYB0 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim13Q9CYB0 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim13Q9CYB0 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim13Q9CYB0 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim13Q9CYB0 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim13Q9CYB0 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim13Q9CYB0 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trim13Q9CYB0 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms