Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Pfdn1Q9CWM4 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pfdn1Q9CWM4 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.54□□□□□ -0.56
Pfdn1Q9CWM4 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pfdn1Q9CWM4 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pfdn1Q9CWM4 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.54□□□□□ -0.56
Pfdn1Q9CWM4 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pfdn1Q9CWM4 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pfdn1Q9CWM4 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.54□□□□□ -0.56
Pfdn1Q9CWM4 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pfdn1Q9CWM4 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.54□□□□□ -0.56
Pfdn1Q9CWM4 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC11.54□□□□□ -0.56
Pfdn1Q9CWM4 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pfdn1Q9CWM4 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pfdn1Q9CWM4 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC11.54□□□□□ -0.56
Pfdn1Q9CWM4 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC11.54□□□□□ -0.56
Pfdn1Q9CWM4 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC11.54□□□□□ -0.56
Pfdn1Q9CWM4 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Pfdn1Q9CWM4 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pfdn1Q9CWM4 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC11.54□□□□□ -0.56
Pfdn1Q9CWM4 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pfdn1Q9CWM4 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC11.54□□□□□ -0.56
Pfdn1Q9CWM4 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pfdn1Q9CWM4 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pfdn1Q9CWM4 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pfdn1Q9CWM4 Gm5124-202ENSMUST00000132683 2083 ntBASIC11.54□□□□□ -0.56
Pfdn1Q9CWM4 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Pfdn1Q9CWM4 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pfdn1Q9CWM4 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pfdn1Q9CWM4 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Pfdn1Q9CWM4 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.54□□□□□ -0.56
Pfdn1Q9CWM4 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pfdn1Q9CWM4 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.54□□□□□ -0.56
Pfdn1Q9CWM4 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pfdn1Q9CWM4 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pfdn1Q9CWM4 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pfdn1Q9CWM4 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pfdn1Q9CWM4 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Pfdn1Q9CWM4 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Pfdn1Q9CWM4 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pfdn1Q9CWM4 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pfdn1Q9CWM4 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Pfdn1Q9CWM4 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.53□□□□□ -0.56
Pfdn1Q9CWM4 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pfdn1Q9CWM4 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Pfdn1Q9CWM4 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pfdn1Q9CWM4 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfdn1Q9CWM4 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.53□□□□□ -0.56
Pfdn1Q9CWM4 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Pfdn1Q9CWM4 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.53□□□□□ -0.56
Pfdn1Q9CWM4 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.53□□□□□ -0.56
Pfdn1Q9CWM4 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Pfdn1Q9CWM4 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pfdn1Q9CWM4 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC11.53□□□□□ -0.56
Pfdn1Q9CWM4 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC11.53□□□□□ -0.56
Pfdn1Q9CWM4 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
Pfdn1Q9CWM4 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfdn1Q9CWM4 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfdn1Q9CWM4 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfdn1Q9CWM4 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfdn1Q9CWM4 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfdn1Q9CWM4 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Pfdn1Q9CWM4 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Pfdn1Q9CWM4 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pfdn1Q9CWM4 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pfdn1Q9CWM4 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC11.53□□□□□ -0.56
Pfdn1Q9CWM4 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfdn1Q9CWM4 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pfdn1Q9CWM4 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfdn1Q9CWM4 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfdn1Q9CWM4 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.53□□□□□ -0.56
Pfdn1Q9CWM4 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfdn1Q9CWM4 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfdn1Q9CWM4 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfdn1Q9CWM4 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfdn1Q9CWM4 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfdn1Q9CWM4 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pfdn1Q9CWM4 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfdn1Q9CWM4 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfdn1Q9CWM4 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfdn1Q9CWM4 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfdn1Q9CWM4 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.53□□□□□ -0.56
Pfdn1Q9CWM4 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Pfdn1Q9CWM4 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfdn1Q9CWM4 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfdn1Q9CWM4 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Pfdn1Q9CWM4 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC11.53□□□□□ -0.56
Pfdn1Q9CWM4 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Pfdn1Q9CWM4 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfdn1Q9CWM4 Daam2-202ENSMUST00000224595 1926 ntBASIC11.52□□□□□ -0.56
Pfdn1Q9CWM4 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pfdn1Q9CWM4 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.52□□□□□ -0.56
Pfdn1Q9CWM4 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Pfdn1Q9CWM4 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pfdn1Q9CWM4 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pfdn1Q9CWM4 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.56
Pfdn1Q9CWM4 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pfdn1Q9CWM4 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pfdn1Q9CWM4 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.52□□□□□ -0.56
Pfdn1Q9CWM4 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms