Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Gm5279-201ENSMUST00000199575 745 ntBASIC15.53■□□□□ 0.08
Smc3Q9CW03 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Smc3Q9CW03 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc3Q9CW03 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Smc3Q9CW03 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc3Q9CW03 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc3Q9CW03 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc3Q9CW03 AC164107.1-201ENSMUST00000227730 2161 ntBASIC15.53■□□□□ 0.08
Smc3Q9CW03 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc3Q9CW03 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Smc3Q9CW03 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc3Q9CW03 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC15.53■□□□□ 0.08
Smc3Q9CW03 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Smc3Q9CW03 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC15.53■□□□□ 0.08
Smc3Q9CW03 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc3Q9CW03 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc3Q9CW03 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
Smc3Q9CW03 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc3Q9CW03 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc3Q9CW03 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smc3Q9CW03 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Smc3Q9CW03 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Smc3Q9CW03 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smc3Q9CW03 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Smc3Q9CW03 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Smc3Q9CW03 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
Smc3Q9CW03 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smc3Q9CW03 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Smc3Q9CW03 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smc3Q9CW03 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Smc3Q9CW03 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smc3Q9CW03 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Smc3Q9CW03 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Smc3Q9CW03 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smc3Q9CW03 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC15.52■□□□□ 0.08
Smc3Q9CW03 Gm15376-201ENSMUST00000122258 783 ntBASIC15.52■□□□□ 0.08
Smc3Q9CW03 Mir6956-201ENSMUST00000183598 62 ntBASIC15.52■□□□□ 0.08
Smc3Q9CW03 Gm29608-201ENSMUST00000190444 463 ntBASIC15.52■□□□□ 0.08
Smc3Q9CW03 Gm9797-201ENSMUST00000052902 613 ntBASIC15.52■□□□□ 0.08
Smc3Q9CW03 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Smc3Q9CW03 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Smc3Q9CW03 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Smc3Q9CW03 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Smc3Q9CW03 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Smc3Q9CW03 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
Smc3Q9CW03 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Smc3Q9CW03 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smc3Q9CW03 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smc3Q9CW03 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Smc3Q9CW03 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Smc3Q9CW03 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Smc3Q9CW03 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smc3Q9CW03 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smc3Q9CW03 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC15.51■□□□□ 0.07
Smc3Q9CW03 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smc3Q9CW03 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smc3Q9CW03 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Smc3Q9CW03 Gm6161-201ENSMUST00000121942 1102 ntBASIC15.51■□□□□ 0.07
Smc3Q9CW03 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC15.51■□□□□ 0.07
Smc3Q9CW03 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC15.51■□□□□ 0.07
Smc3Q9CW03 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Smc3Q9CW03 Gm26464-201ENSMUST00000157094 305 ntBASIC15.51■□□□□ 0.07
Smc3Q9CW03 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Smc3Q9CW03 Gm6254-201ENSMUST00000168178 1072 ntBASIC15.51■□□□□ 0.07
Smc3Q9CW03 Gm6153-201ENSMUST00000172004 1058 ntBASIC15.51■□□□□ 0.07
Smc3Q9CW03 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Smc3Q9CW03 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Smc3Q9CW03 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Smc3Q9CW03 Gm5641-202ENSMUST00000198699 1080 ntBASIC15.51■□□□□ 0.07
Smc3Q9CW03 Gm19078-201ENSMUST00000206311 727 ntBASIC15.51■□□□□ 0.07
Smc3Q9CW03 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC15.51■□□□□ 0.07
Smc3Q9CW03 CT573086.1-201ENSMUST00000227202 1074 ntBASIC15.51■□□□□ 0.07
Smc3Q9CW03 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC15.51■□□□□ 0.07
Smc3Q9CW03 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smc3Q9CW03 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smc3Q9CW03 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smc3Q9CW03 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smc3Q9CW03 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smc3Q9CW03 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smc3Q9CW03 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Smc3Q9CW03 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Smc3Q9CW03 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Smc3Q9CW03 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smc3Q9CW03 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Smc3Q9CW03 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smc3Q9CW03 Gm11524-201ENSMUST00000119349 807 ntBASIC15.5■□□□□ 0.07
Smc3Q9CW03 Gm12151-201ENSMUST00000121374 290 ntBASIC15.5■□□□□ 0.07
Smc3Q9CW03 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Smc3Q9CW03 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC15.5■□□□□ 0.07
Smc3Q9CW03 Gm27838-201ENSMUST00000184829 128 ntBASIC15.5■□□□□ 0.07
Smc3Q9CW03 Gm19931-201ENSMUST00000198920 368 ntBASIC15.5■□□□□ 0.07
Smc3Q9CW03 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC15.5■□□□□ 0.07
Smc3Q9CW03 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC15.5■□□□□ 0.07
Smc3Q9CW03 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smc3Q9CW03 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
Smc3Q9CW03 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Smc3Q9CW03 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smc3Q9CW03 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smc3Q9CW03 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smc3Q9CW03 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms