Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Gm44719-201ENSMUST00000206404 149 ntBASIC12.93□□□□□ -0.34
Trim16Q99PP9 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.93□□□□□ -0.34
Trim16Q99PP9 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim16Q99PP9 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim16Q99PP9 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trim16Q99PP9 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim16Q99PP9 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim16Q99PP9 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trim16Q99PP9 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.93□□□□□ -0.34
Trim16Q99PP9 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim16Q99PP9 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim16Q99PP9 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.93□□□□□ -0.34
Trim16Q99PP9 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim16Q99PP9 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim16Q99PP9 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim16Q99PP9 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim16Q99PP9 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim16Q99PP9 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim16Q99PP9 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.93□□□□□ -0.34
Trim16Q99PP9 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim16Q99PP9 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trim16Q99PP9 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim16Q99PP9 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim16Q99PP9 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.92□□□□□ -0.34
Trim16Q99PP9 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.92□□□□□ -0.34
Trim16Q99PP9 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trim16Q99PP9 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim16Q99PP9 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim16Q99PP9 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim16Q99PP9 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim16Q99PP9 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trim16Q99PP9 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim16Q99PP9 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Trim16Q99PP9 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.92□□□□□ -0.34
Trim16Q99PP9 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim16Q99PP9 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim16Q99PP9 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim16Q99PP9 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.92□□□□□ -0.34
Trim16Q99PP9 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim16Q99PP9 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim16Q99PP9 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim16Q99PP9 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim16Q99PP9 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim16Q99PP9 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim16Q99PP9 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim16Q99PP9 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim16Q99PP9 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trim16Q99PP9 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.92□□□□□ -0.34
Trim16Q99PP9 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trim16Q99PP9 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim16Q99PP9 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim16Q99PP9 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim16Q99PP9 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim16Q99PP9 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim16Q99PP9 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim16Q99PP9 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim16Q99PP9 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim16Q99PP9 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trim16Q99PP9 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trim16Q99PP9 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trim16Q99PP9 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.91□□□□□ -0.34
Trim16Q99PP9 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim16Q99PP9 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trim16Q99PP9 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim16Q99PP9 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim16Q99PP9 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim16Q99PP9 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim16Q99PP9 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim16Q99PP9 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim16Q99PP9 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim16Q99PP9 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim16Q99PP9 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim16Q99PP9 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim16Q99PP9 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Trim16Q99PP9 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trim16Q99PP9 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trim16Q99PP9 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim16Q99PP9 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trim16Q99PP9 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim16Q99PP9 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.91□□□□□ -0.34
Trim16Q99PP9 Gm43094-201ENSMUST00000196549 921 ntBASIC12.91□□□□□ -0.34
Trim16Q99PP9 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.91□□□□□ -0.34
Trim16Q99PP9 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.91□□□□□ -0.34
Trim16Q99PP9 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim16Q99PP9 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim16Q99PP9 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.91□□□□□ -0.34
Trim16Q99PP9 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim16Q99PP9 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim16Q99PP9 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Trim16Q99PP9 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trim16Q99PP9 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim16Q99PP9 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Trim16Q99PP9 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim16Q99PP9 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trim16Q99PP9 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Trim16Q99PP9 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim16Q99PP9 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trim16Q99PP9 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim16Q99PP9 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim16Q99PP9 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms