Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Msh4Q99MT2 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Msh4Q99MT2 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.87□□□□□ -0.35
Msh4Q99MT2 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Msh4Q99MT2 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Msh4Q99MT2 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Msh4Q99MT2 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.87□□□□□ -0.35
Msh4Q99MT2 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.87□□□□□ -0.35
Msh4Q99MT2 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Msh4Q99MT2 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.87□□□□□ -0.35
Msh4Q99MT2 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Msh4Q99MT2 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Msh4Q99MT2 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Msh4Q99MT2 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Msh4Q99MT2 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Msh4Q99MT2 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Msh4Q99MT2 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Msh4Q99MT2 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.87□□□□□ -0.35
Msh4Q99MT2 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.87□□□□□ -0.35
Msh4Q99MT2 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Msh4Q99MT2 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Msh4Q99MT2 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Msh4Q99MT2 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.87□□□□□ -0.35
Msh4Q99MT2 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Msh4Q99MT2 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Msh4Q99MT2 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Msh4Q99MT2 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Msh4Q99MT2 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Msh4Q99MT2 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.86□□□□□ -0.35
Msh4Q99MT2 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Msh4Q99MT2 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Msh4Q99MT2 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Msh4Q99MT2 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Msh4Q99MT2 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Msh4Q99MT2 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Msh4Q99MT2 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Msh4Q99MT2 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Msh4Q99MT2 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Msh4Q99MT2 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Msh4Q99MT2 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Msh4Q99MT2 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Msh4Q99MT2 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Msh4Q99MT2 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.86□□□□□ -0.35
Msh4Q99MT2 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Msh4Q99MT2 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.86□□□□□ -0.35
Msh4Q99MT2 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Msh4Q99MT2 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Msh4Q99MT2 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Msh4Q99MT2 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.86□□□□□ -0.35
Msh4Q99MT2 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Msh4Q99MT2 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.86□□□□□ -0.35
Msh4Q99MT2 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Msh4Q99MT2 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Msh4Q99MT2 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.86□□□□□ -0.35
Msh4Q99MT2 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.86□□□□□ -0.35
Msh4Q99MT2 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.86□□□□□ -0.35
Msh4Q99MT2 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Msh4Q99MT2 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Msh4Q99MT2 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Msh4Q99MT2 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Msh4Q99MT2 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Msh4Q99MT2 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Msh4Q99MT2 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Msh4Q99MT2 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Msh4Q99MT2 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Msh4Q99MT2 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Msh4Q99MT2 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Msh4Q99MT2 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Msh4Q99MT2 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Msh4Q99MT2 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Msh4Q99MT2 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Msh4Q99MT2 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Msh4Q99MT2 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Msh4Q99MT2 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Msh4Q99MT2 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Msh4Q99MT2 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.85□□□□□ -0.35
Msh4Q99MT2 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msh4Q99MT2 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msh4Q99MT2 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Msh4Q99MT2 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msh4Q99MT2 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msh4Q99MT2 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msh4Q99MT2 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Msh4Q99MT2 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Msh4Q99MT2 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.85□□□□□ -0.35
Msh4Q99MT2 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msh4Q99MT2 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msh4Q99MT2 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msh4Q99MT2 Gm15770-201ENSMUST00000117498 584 ntBASIC12.85□□□□□ -0.35
Msh4Q99MT2 Gm13689-201ENSMUST00000119360 685 ntBASIC12.85□□□□□ -0.35
Msh4Q99MT2 Gm15806-201ENSMUST00000120696 955 ntBASIC12.85□□□□□ -0.35
Msh4Q99MT2 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.85□□□□□ -0.35
Msh4Q99MT2 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Msh4Q99MT2 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Msh4Q99MT2 Gm15429-201ENSMUST00000151268 798 ntBASIC12.85□□□□□ -0.35
Msh4Q99MT2 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Msh4Q99MT2 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.85□□□□□ -0.35
Msh4Q99MT2 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Msh4Q99MT2 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msh4Q99MT2 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms