Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC13.66□□□□□ -0.22
Col25a1Q99MQ5 Gm18027-201ENSMUST00000218947 619 ntBASIC13.66□□□□□ -0.22
Col25a1Q99MQ5 AC126799.1-201ENSMUST00000221976 246 ntBASIC13.66□□□□□ -0.22
Col25a1Q99MQ5 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col25a1Q99MQ5 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col25a1Q99MQ5 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.66□□□□□ -0.22
Col25a1Q99MQ5 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Col25a1Q99MQ5 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col25a1Q99MQ5 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col25a1Q99MQ5 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Col25a1Q99MQ5 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col25a1Q99MQ5 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Col25a1Q99MQ5 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col25a1Q99MQ5 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col25a1Q99MQ5 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Col25a1Q99MQ5 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Col25a1Q99MQ5 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col25a1Q99MQ5 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col25a1Q99MQ5 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Col25a1Q99MQ5 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Col25a1Q99MQ5 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col25a1Q99MQ5 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col25a1Q99MQ5 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.65□□□□□ -0.22
Col25a1Q99MQ5 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col25a1Q99MQ5 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col25a1Q99MQ5 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col25a1Q99MQ5 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col25a1Q99MQ5 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col25a1Q99MQ5 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col25a1Q99MQ5 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col25a1Q99MQ5 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col25a1Q99MQ5 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col25a1Q99MQ5 Gm13316-201ENSMUST00000140537 691 ntBASIC13.65□□□□□ -0.22
Col25a1Q99MQ5 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col25a1Q99MQ5 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col25a1Q99MQ5 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.65□□□□□ -0.22
Col25a1Q99MQ5 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Col25a1Q99MQ5 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC13.65□□□□□ -0.22
Col25a1Q99MQ5 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col25a1Q99MQ5 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.65□□□□□ -0.22
Col25a1Q99MQ5 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col25a1Q99MQ5 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC13.65□□□□□ -0.22
Col25a1Q99MQ5 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC13.65□□□□□ -0.22
Col25a1Q99MQ5 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.65□□□□□ -0.22
Col25a1Q99MQ5 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col25a1Q99MQ5 Gm9873-201ENSMUST00000063891 1097 ntBASIC13.65□□□□□ -0.22
Col25a1Q99MQ5 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col25a1Q99MQ5 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col25a1Q99MQ5 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Col25a1Q99MQ5 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.65□□□□□ -0.22
Col25a1Q99MQ5 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col25a1Q99MQ5 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col25a1Q99MQ5 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.65□□□□□ -0.22
Col25a1Q99MQ5 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col25a1Q99MQ5 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col25a1Q99MQ5 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Col25a1Q99MQ5 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Col25a1Q99MQ5 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Col25a1Q99MQ5 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col25a1Q99MQ5 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col25a1Q99MQ5 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col25a1Q99MQ5 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col25a1Q99MQ5 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col25a1Q99MQ5 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col25a1Q99MQ5 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col25a1Q99MQ5 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col25a1Q99MQ5 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col25a1Q99MQ5 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col25a1Q99MQ5 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col25a1Q99MQ5 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col25a1Q99MQ5 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col25a1Q99MQ5 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col25a1Q99MQ5 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col25a1Q99MQ5 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col25a1Q99MQ5 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col25a1Q99MQ5 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC13.64□□□□□ -0.23
Col25a1Q99MQ5 Gm14460-201ENSMUST00000121511 639 ntBASIC13.64□□□□□ -0.23
Col25a1Q99MQ5 Gm8908-201ENSMUST00000121633 1024 ntBASIC13.64□□□□□ -0.23
Col25a1Q99MQ5 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC13.64□□□□□ -0.23
Col25a1Q99MQ5 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC13.64□□□□□ -0.23
Col25a1Q99MQ5 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Col25a1Q99MQ5 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
Col25a1Q99MQ5 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC13.64□□□□□ -0.23
Col25a1Q99MQ5 Gm8492-201ENSMUST00000182375 987 ntBASIC13.64□□□□□ -0.23
Col25a1Q99MQ5 Mir6923-201ENSMUST00000184592 72 ntBASIC13.64□□□□□ -0.23
Col25a1Q99MQ5 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Col25a1Q99MQ5 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC13.64□□□□□ -0.23
Col25a1Q99MQ5 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col25a1Q99MQ5 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col25a1Q99MQ5 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Col25a1Q99MQ5 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col25a1Q99MQ5 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col25a1Q99MQ5 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.64□□□□□ -0.23
Col25a1Q99MQ5 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Col25a1Q99MQ5 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.64□□□□□ -0.23
Col25a1Q99MQ5 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.64□□□□□ -0.23
Col25a1Q99MQ5 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col25a1Q99MQ5 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col25a1Q99MQ5 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col25a1Q99MQ5 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms