Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.38□□□□□ -0.43
Nkx6-1Q99MA9 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.38□□□□□ -0.43
Nkx6-1Q99MA9 Gm29787-201ENSMUST00000222129 849 ntBASIC12.38□□□□□ -0.43
Nkx6-1Q99MA9 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx6-1Q99MA9 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx6-1Q99MA9 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx6-1Q99MA9 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx6-1Q99MA9 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx6-1Q99MA9 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx6-1Q99MA9 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.38□□□□□ -0.43
Nkx6-1Q99MA9 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx6-1Q99MA9 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx6-1Q99MA9 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx6-1Q99MA9 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.38□□□□□ -0.43
Nkx6-1Q99MA9 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx6-1Q99MA9 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx6-1Q99MA9 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Nkx6-1Q99MA9 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx6-1Q99MA9 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Nkx6-1Q99MA9 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx6-1Q99MA9 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx6-1Q99MA9 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.38□□□□□ -0.43
Nkx6-1Q99MA9 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Nkx6-1Q99MA9 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx6-1Q99MA9 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx6-1Q99MA9 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx6-1Q99MA9 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx6-1Q99MA9 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Nkx6-1Q99MA9 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.37□□□□□ -0.43
Nkx6-1Q99MA9 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx6-1Q99MA9 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx6-1Q99MA9 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Nkx6-1Q99MA9 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx6-1Q99MA9 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx6-1Q99MA9 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx6-1Q99MA9 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx6-1Q99MA9 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx6-1Q99MA9 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Nkx6-1Q99MA9 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx6-1Q99MA9 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx6-1Q99MA9 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.37□□□□□ -0.43
Nkx6-1Q99MA9 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx6-1Q99MA9 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx6-1Q99MA9 Gm15276-201ENSMUST00000145953 498 ntBASIC12.37□□□□□ -0.43
Nkx6-1Q99MA9 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Nkx6-1Q99MA9 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.37□□□□□ -0.43
Nkx6-1Q99MA9 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx6-1Q99MA9 Gm34767-201ENSMUST00000191813 1062 ntBASIC12.37□□□□□ -0.43
Nkx6-1Q99MA9 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.37□□□□□ -0.43
Nkx6-1Q99MA9 Gm13097-201ENSMUST00000210722 397 ntBASIC12.37□□□□□ -0.43
Nkx6-1Q99MA9 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC12.37□□□□□ -0.43
Nkx6-1Q99MA9 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.37□□□□□ -0.43
Nkx6-1Q99MA9 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx6-1Q99MA9 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.37□□□□□ -0.43
Nkx6-1Q99MA9 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx6-1Q99MA9 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx6-1Q99MA9 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.37□□□□□ -0.43
Nkx6-1Q99MA9 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx6-1Q99MA9 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx6-1Q99MA9 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx6-1Q99MA9 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Nkx6-1Q99MA9 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx6-1Q99MA9 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx6-1Q99MA9 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx6-1Q99MA9 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx6-1Q99MA9 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx6-1Q99MA9 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx6-1Q99MA9 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx6-1Q99MA9 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx6-1Q99MA9 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.37□□□□□ -0.43
Nkx6-1Q99MA9 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx6-1Q99MA9 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Nkx6-1Q99MA9 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx6-1Q99MA9 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx6-1Q99MA9 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Nkx6-1Q99MA9 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx6-1Q99MA9 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx6-1Q99MA9 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx6-1Q99MA9 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx6-1Q99MA9 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx6-1Q99MA9 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx6-1Q99MA9 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx6-1Q99MA9 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx6-1Q99MA9 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx6-1Q99MA9 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx6-1Q99MA9 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx6-1Q99MA9 Gm23270-201ENSMUST00000104055 131 ntBASIC12.36□□□□□ -0.43
Nkx6-1Q99MA9 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC12.36□□□□□ -0.43
Nkx6-1Q99MA9 Gm17208-201ENSMUST00000168388 535 ntBASIC12.36□□□□□ -0.43
Nkx6-1Q99MA9 Gm28693-202ENSMUST00000190758 331 ntBASIC12.36□□□□□ -0.43
Nkx6-1Q99MA9 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx6-1Q99MA9 Gm38317-201ENSMUST00000195564 343 ntBASIC12.36□□□□□ -0.43
Nkx6-1Q99MA9 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.36□□□□□ -0.43
Nkx6-1Q99MA9 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Nkx6-1Q99MA9 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx6-1Q99MA9 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Nkx6-1Q99MA9 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx6-1Q99MA9 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.36□□□□□ -0.43
Nkx6-1Q99MA9 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx6-1Q99MA9 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms