Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Scrt1Q99M85 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.59□□□□□ -0.55
Scrt1Q99M85 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Scrt1Q99M85 Gm25261-201ENSMUST00000157416 134 ntBASIC11.59□□□□□ -0.55
Scrt1Q99M85 Gm17376-201ENSMUST00000166016 84 ntBASIC11.59□□□□□ -0.55
Scrt1Q99M85 Gm29608-201ENSMUST00000190444 463 ntBASIC11.59□□□□□ -0.55
Scrt1Q99M85 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Scrt1Q99M85 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Scrt1Q99M85 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Scrt1Q99M85 Gm5161-201ENSMUST00000075243 853 ntBASIC11.59□□□□□ -0.55
Scrt1Q99M85 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC11.59□□□□□ -0.55
Scrt1Q99M85 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Scrt1Q99M85 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Scrt1Q99M85 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Scrt1Q99M85 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Scrt1Q99M85 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Scrt1Q99M85 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Scrt1Q99M85 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Scrt1Q99M85 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Scrt1Q99M85 Gm13859-201ENSMUST00000119936 1423 ntBASIC11.59□□□□□ -0.55
Scrt1Q99M85 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Scrt1Q99M85 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Scrt1Q99M85 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC11.59□□□□□ -0.55
Scrt1Q99M85 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Scrt1Q99M85 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Scrt1Q99M85 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Scrt1Q99M85 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Scrt1Q99M85 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Scrt1Q99M85 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.58□□□□□ -0.55
Scrt1Q99M85 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC11.58□□□□□ -0.56
Scrt1Q99M85 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scrt1Q99M85 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Scrt1Q99M85 Gm13730-201ENSMUST00000121036 1462 ntBASIC11.58□□□□□ -0.56
Scrt1Q99M85 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC11.58□□□□□ -0.56
Scrt1Q99M85 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scrt1Q99M85 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scrt1Q99M85 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scrt1Q99M85 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.58□□□□□ -0.56
Scrt1Q99M85 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Scrt1Q99M85 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scrt1Q99M85 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
Scrt1Q99M85 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.58□□□□□ -0.56
Scrt1Q99M85 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.58□□□□□ -0.56
Scrt1Q99M85 Gm38000-201ENSMUST00000192390 1215 ntBASIC11.58□□□□□ -0.56
Scrt1Q99M85 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Scrt1Q99M85 Gm4971-201ENSMUST00000205991 1108 ntBASIC11.58□□□□□ -0.56
Scrt1Q99M85 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.58□□□□□ -0.56
Scrt1Q99M85 Itm2b-204ENSMUST00000228637 783 ntBASIC11.58□□□□□ -0.56
Scrt1Q99M85 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scrt1Q99M85 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scrt1Q99M85 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scrt1Q99M85 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Scrt1Q99M85 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scrt1Q99M85 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Scrt1Q99M85 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scrt1Q99M85 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scrt1Q99M85 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scrt1Q99M85 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scrt1Q99M85 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scrt1Q99M85 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scrt1Q99M85 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scrt1Q99M85 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Scrt1Q99M85 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.58□□□□□ -0.56
Scrt1Q99M85 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.58□□□□□ -0.56
Scrt1Q99M85 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scrt1Q99M85 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scrt1Q99M85 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scrt1Q99M85 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Scrt1Q99M85 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Scrt1Q99M85 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Scrt1Q99M85 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Scrt1Q99M85 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Scrt1Q99M85 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Scrt1Q99M85 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Scrt1Q99M85 Gm37411-201ENSMUST00000194180 2282 ntBASIC11.57□□□□□ -0.56
Scrt1Q99M85 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC11.57□□□□□ -0.56
Scrt1Q99M85 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC11.57□□□□□ -0.56
Scrt1Q99M85 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Scrt1Q99M85 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Scrt1Q99M85 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Scrt1Q99M85 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Scrt1Q99M85 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Scrt1Q99M85 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Scrt1Q99M85 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Scrt1Q99M85 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Scrt1Q99M85 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.57□□□□□ -0.56
Scrt1Q99M85 Gm12997-201ENSMUST00000120207 640 ntBASIC11.57□□□□□ -0.56
Scrt1Q99M85 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Scrt1Q99M85 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Scrt1Q99M85 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC11.57□□□□□ -0.56
Scrt1Q99M85 Gm2991-201ENSMUST00000173338 480 ntBASIC11.57□□□□□ -0.56
Scrt1Q99M85 Gm25927-201ENSMUST00000175058 117 ntBASIC11.57□□□□□ -0.56
Scrt1Q99M85 Gm29396-201ENSMUST00000185659 716 ntBASIC11.57□□□□□ -0.56
Scrt1Q99M85 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.57□□□□□ -0.56
Scrt1Q99M85 Gm43068-201ENSMUST00000201095 1273 ntBASIC11.57□□□□□ -0.56
Scrt1Q99M85 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.57□□□□□ -0.56
Scrt1Q99M85 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Scrt1Q99M85 AC154595.3-201ENSMUST00000224579 384 ntBASIC11.57□□□□□ -0.56
Scrt1Q99M85 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Scrt1Q99M85 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms