Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cstf3Q99LI7 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cstf3Q99LI7 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cstf3Q99LI7 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cstf3Q99LI7 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Cstf3Q99LI7 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cstf3Q99LI7 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cstf3Q99LI7 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cstf3Q99LI7 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cstf3Q99LI7 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cstf3Q99LI7 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.78□□□□□ -0.36
Cstf3Q99LI7 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cstf3Q99LI7 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cstf3Q99LI7 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.78□□□□□ -0.36
Cstf3Q99LI7 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cstf3Q99LI7 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.78□□□□□ -0.36
Cstf3Q99LI7 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cstf3Q99LI7 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cstf3Q99LI7 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Cstf3Q99LI7 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cstf3Q99LI7 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Cstf3Q99LI7 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cstf3Q99LI7 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Cstf3Q99LI7 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cstf3Q99LI7 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cstf3Q99LI7 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cstf3Q99LI7 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cstf3Q99LI7 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cstf3Q99LI7 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cstf3Q99LI7 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cstf3Q99LI7 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cstf3Q99LI7 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Cstf3Q99LI7 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cstf3Q99LI7 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.36
Cstf3Q99LI7 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Cstf3Q99LI7 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.77□□□□□ -0.36
Cstf3Q99LI7 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cstf3Q99LI7 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cstf3Q99LI7 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Cstf3Q99LI7 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.77□□□□□ -0.36
Cstf3Q99LI7 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cstf3Q99LI7 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cstf3Q99LI7 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cstf3Q99LI7 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cstf3Q99LI7 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cstf3Q99LI7 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cstf3Q99LI7 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cstf3Q99LI7 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cstf3Q99LI7 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cstf3Q99LI7 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Cstf3Q99LI7 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cstf3Q99LI7 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.77□□□□□ -0.37
Cstf3Q99LI7 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cstf3Q99LI7 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.77□□□□□ -0.37
Cstf3Q99LI7 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.77□□□□□ -0.37
Cstf3Q99LI7 Gm20949-201ENSMUST00000206478 952 ntBASIC12.77□□□□□ -0.37
Cstf3Q99LI7 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.77□□□□□ -0.37
Cstf3Q99LI7 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.77□□□□□ -0.37
Cstf3Q99LI7 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cstf3Q99LI7 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cstf3Q99LI7 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cstf3Q99LI7 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cstf3Q99LI7 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cstf3Q99LI7 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cstf3Q99LI7 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cstf3Q99LI7 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.77□□□□□ -0.37
Cstf3Q99LI7 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cstf3Q99LI7 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cstf3Q99LI7 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cstf3Q99LI7 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cstf3Q99LI7 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cstf3Q99LI7 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cstf3Q99LI7 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.77□□□□□ -0.37
Cstf3Q99LI7 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.77□□□□□ -0.37
Cstf3Q99LI7 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.77□□□□□ -0.37
Cstf3Q99LI7 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cstf3Q99LI7 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cstf3Q99LI7 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Cstf3Q99LI7 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cstf3Q99LI7 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cstf3Q99LI7 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.77□□□□□ -0.37
Cstf3Q99LI7 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cstf3Q99LI7 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cstf3Q99LI7 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cstf3Q99LI7 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Cstf3Q99LI7 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cstf3Q99LI7 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Cstf3Q99LI7 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cstf3Q99LI7 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cstf3Q99LI7 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Cstf3Q99LI7 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cstf3Q99LI7 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Cstf3Q99LI7 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cstf3Q99LI7 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cstf3Q99LI7 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cstf3Q99LI7 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.76□□□□□ -0.37
Cstf3Q99LI7 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cstf3Q99LI7 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.76□□□□□ -0.37
Cstf3Q99LI7 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.76□□□□□ -0.37
Cstf3Q99LI7 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms