Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cstf1Q99LC2 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cstf1Q99LC2 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Cstf1Q99LC2 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cstf1Q99LC2 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Cstf1Q99LC2 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cstf1Q99LC2 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cstf1Q99LC2 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cstf1Q99LC2 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cstf1Q99LC2 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cstf1Q99LC2 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Cstf1Q99LC2 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cstf1Q99LC2 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cstf1Q99LC2 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cstf1Q99LC2 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cstf1Q99LC2 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cstf1Q99LC2 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cstf1Q99LC2 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cstf1Q99LC2 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.2□□□□□ -0.3
Cstf1Q99LC2 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Cstf1Q99LC2 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cstf1Q99LC2 Gm16202-201ENSMUST00000117532 544 ntBASIC13.2□□□□□ -0.3
Cstf1Q99LC2 Gm14277-201ENSMUST00000121195 360 ntBASIC13.2□□□□□ -0.3
Cstf1Q99LC2 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC13.2□□□□□ -0.3
Cstf1Q99LC2 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.2□□□□□ -0.3
Cstf1Q99LC2 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.2□□□□□ -0.3
Cstf1Q99LC2 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Cstf1Q99LC2 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cstf1Q99LC2 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC13.2□□□□□ -0.3
Cstf1Q99LC2 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cstf1Q99LC2 Gm45186-201ENSMUST00000206874 478 ntBASIC13.2□□□□□ -0.3
Cstf1Q99LC2 Gm19163-201ENSMUST00000223313 780 ntBASIC13.2□□□□□ -0.3
Cstf1Q99LC2 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cstf1Q99LC2 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cstf1Q99LC2 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cstf1Q99LC2 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cstf1Q99LC2 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cstf1Q99LC2 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cstf1Q99LC2 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Cstf1Q99LC2 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cstf1Q99LC2 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cstf1Q99LC2 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cstf1Q99LC2 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cstf1Q99LC2 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cstf1Q99LC2 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cstf1Q99LC2 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.2□□□□□ -0.3
Cstf1Q99LC2 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Cstf1Q99LC2 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.2□□□□□ -0.3
Cstf1Q99LC2 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cstf1Q99LC2 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Cstf1Q99LC2 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cstf1Q99LC2 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cstf1Q99LC2 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cstf1Q99LC2 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cstf1Q99LC2 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cstf1Q99LC2 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cstf1Q99LC2 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cstf1Q99LC2 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cstf1Q99LC2 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cstf1Q99LC2 Gm10782-202ENSMUST00000223775 1480 ntBASIC13.19□□□□□ -0.3
Cstf1Q99LC2 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.19□□□□□ -0.3
Cstf1Q99LC2 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cstf1Q99LC2 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Cstf1Q99LC2 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Cstf1Q99LC2 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC13.19□□□□□ -0.3
Cstf1Q99LC2 Gm12201-201ENSMUST00000120657 1234 ntBASIC13.19□□□□□ -0.3
Cstf1Q99LC2 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC13.19□□□□□ -0.3
Cstf1Q99LC2 Gm26185-201ENSMUST00000157692 266 ntBASIC13.19□□□□□ -0.3
Cstf1Q99LC2 Gm24514-201ENSMUST00000174961 285 ntBASIC13.19□□□□□ -0.3
Cstf1Q99LC2 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cstf1Q99LC2 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC13.19□□□□□ -0.3
Cstf1Q99LC2 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cstf1Q99LC2 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC13.19□□□□□ -0.3
Cstf1Q99LC2 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC13.19□□□□□ -0.3
Cstf1Q99LC2 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cstf1Q99LC2 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cstf1Q99LC2 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cstf1Q99LC2 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cstf1Q99LC2 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cstf1Q99LC2 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cstf1Q99LC2 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.19□□□□□ -0.3
Cstf1Q99LC2 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cstf1Q99LC2 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.19□□□□□ -0.3
Cstf1Q99LC2 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cstf1Q99LC2 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cstf1Q99LC2 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cstf1Q99LC2 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cstf1Q99LC2 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Cstf1Q99LC2 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cstf1Q99LC2 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cstf1Q99LC2 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cstf1Q99LC2 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cstf1Q99LC2 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Cstf1Q99LC2 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cstf1Q99LC2 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Cstf1Q99LC2 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Cstf1Q99LC2 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cstf1Q99LC2 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Cstf1Q99LC2 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC13.18□□□□□ -0.3
Cstf1Q99LC2 Gm4909-201ENSMUST00000118749 794 ntBASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms