Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.05□□□□□ -0.48
Lims1Q99JW4 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lims1Q99JW4 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lims1Q99JW4 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lims1Q99JW4 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lims1Q99JW4 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Lims1Q99JW4 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lims1Q99JW4 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lims1Q99JW4 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lims1Q99JW4 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lims1Q99JW4 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lims1Q99JW4 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lims1Q99JW4 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lims1Q99JW4 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.04□□□□□ -0.48
Lims1Q99JW4 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.04□□□□□ -0.48
Lims1Q99JW4 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lims1Q99JW4 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Lims1Q99JW4 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.04□□□□□ -0.48
Lims1Q99JW4 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Lims1Q99JW4 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.04□□□□□ -0.48
Lims1Q99JW4 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lims1Q99JW4 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Lims1Q99JW4 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lims1Q99JW4 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lims1Q99JW4 Gm19078-201ENSMUST00000206311 727 ntBASIC12.04□□□□□ -0.48
Lims1Q99JW4 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.04□□□□□ -0.48
Lims1Q99JW4 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lims1Q99JW4 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lims1Q99JW4 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lims1Q99JW4 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lims1Q99JW4 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lims1Q99JW4 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC12.04□□□□□ -0.48
Lims1Q99JW4 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lims1Q99JW4 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lims1Q99JW4 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lims1Q99JW4 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Lims1Q99JW4 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lims1Q99JW4 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.04□□□□□ -0.48
Lims1Q99JW4 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Lims1Q99JW4 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lims1Q99JW4 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lims1Q99JW4 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lims1Q99JW4 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lims1Q99JW4 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Lims1Q99JW4 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.04□□□□□ -0.48
Lims1Q99JW4 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lims1Q99JW4 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lims1Q99JW4 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.04□□□□□ -0.48
Lims1Q99JW4 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.04□□□□□ -0.48
Lims1Q99JW4 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lims1Q99JW4 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lims1Q99JW4 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Lims1Q99JW4 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lims1Q99JW4 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Lims1Q99JW4 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lims1Q99JW4 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.03□□□□□ -0.48
Lims1Q99JW4 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lims1Q99JW4 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Lims1Q99JW4 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lims1Q99JW4 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lims1Q99JW4 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lims1Q99JW4 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lims1Q99JW4 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.03□□□□□ -0.48
Lims1Q99JW4 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.03□□□□□ -0.48
Lims1Q99JW4 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.03□□□□□ -0.48
Lims1Q99JW4 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lims1Q99JW4 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.03□□□□□ -0.48
Lims1Q99JW4 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.03□□□□□ -0.48
Lims1Q99JW4 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.03□□□□□ -0.48
Lims1Q99JW4 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.03□□□□□ -0.48
Lims1Q99JW4 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lims1Q99JW4 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lims1Q99JW4 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lims1Q99JW4 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lims1Q99JW4 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lims1Q99JW4 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lims1Q99JW4 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lims1Q99JW4 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.03□□□□□ -0.48
Lims1Q99JW4 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lims1Q99JW4 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lims1Q99JW4 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lims1Q99JW4 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lims1Q99JW4 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lims1Q99JW4 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lims1Q99JW4 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.03□□□□□ -0.48
Lims1Q99JW4 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lims1Q99JW4 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lims1Q99JW4 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Lims1Q99JW4 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Lims1Q99JW4 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lims1Q99JW4 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lims1Q99JW4 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lims1Q99JW4 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lims1Q99JW4 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lims1Q99JW4 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.03□□□□□ -0.48
Lims1Q99JW4 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lims1Q99JW4 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lims1Q99JW4 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lims1Q99JW4 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lims1Q99JW4 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms