Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcd2Q99JR8 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcd2Q99JR8 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcd2Q99JR8 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Smarcd2Q99JR8 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcd2Q99JR8 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcd2Q99JR8 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcd2Q99JR8 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcd2Q99JR8 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcd2Q99JR8 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Smarcd2Q99JR8 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcd2Q99JR8 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Smarcd2Q99JR8 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcd2Q99JR8 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcd2Q99JR8 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Smarcd2Q99JR8 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcd2Q99JR8 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC13.28□□□□□ -0.28
Smarcd2Q99JR8 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC13.28□□□□□ -0.28
Smarcd2Q99JR8 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.28□□□□□ -0.28
Smarcd2Q99JR8 Gm5904-201ENSMUST00000210286 865 ntBASIC13.28□□□□□ -0.28
Smarcd2Q99JR8 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC13.28□□□□□ -0.28
Smarcd2Q99JR8 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcd2Q99JR8 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcd2Q99JR8 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcd2Q99JR8 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcd2Q99JR8 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcd2Q99JR8 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcd2Q99JR8 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcd2Q99JR8 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcd2Q99JR8 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcd2Q99JR8 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.28□□□□□ -0.28
Smarcd2Q99JR8 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcd2Q99JR8 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
Smarcd2Q99JR8 Gm10782-202ENSMUST00000223775 1480 ntBASIC13.28□□□□□ -0.28
Smarcd2Q99JR8 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcd2Q99JR8 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcd2Q99JR8 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcd2Q99JR8 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcd2Q99JR8 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.28□□□□□ -0.28
Smarcd2Q99JR8 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.28□□□□□ -0.28
Smarcd2Q99JR8 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcd2Q99JR8 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.28□□□□□ -0.28
Smarcd2Q99JR8 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.28□□□□□ -0.28
Smarcd2Q99JR8 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcd2Q99JR8 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smarcd2Q99JR8 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smarcd2Q99JR8 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smarcd2Q99JR8 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smarcd2Q99JR8 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smarcd2Q99JR8 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smarcd2Q99JR8 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smarcd2Q99JR8 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smarcd2Q99JR8 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Smarcd2Q99JR8 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
Smarcd2Q99JR8 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smarcd2Q99JR8 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Smarcd2Q99JR8 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcd2Q99JR8 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.27□□□□□ -0.29
Smarcd2Q99JR8 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Smarcd2Q99JR8 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC13.27□□□□□ -0.29
Smarcd2Q99JR8 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.27□□□□□ -0.29
Smarcd2Q99JR8 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.27□□□□□ -0.29
Smarcd2Q99JR8 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.27□□□□□ -0.29
Smarcd2Q99JR8 Gm8099-201ENSMUST00000200510 742 ntBASIC13.27□□□□□ -0.29
Smarcd2Q99JR8 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcd2Q99JR8 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC13.27□□□□□ -0.29
Smarcd2Q99JR8 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcd2Q99JR8 Gm7293-201ENSMUST00000216682 1007 ntBASIC13.27□□□□□ -0.29
Smarcd2Q99JR8 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcd2Q99JR8 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcd2Q99JR8 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC13.27□□□□□ -0.29
Smarcd2Q99JR8 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Smarcd2Q99JR8 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcd2Q99JR8 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcd2Q99JR8 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Smarcd2Q99JR8 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
Smarcd2Q99JR8 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcd2Q99JR8 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcd2Q99JR8 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC13.27□□□□□ -0.29
Smarcd2Q99JR8 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Smarcd2Q99JR8 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcd2Q99JR8 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Smarcd2Q99JR8 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcd2Q99JR8 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Smarcd2Q99JR8 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
Smarcd2Q99JR8 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcd2Q99JR8 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcd2Q99JR8 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcd2Q99JR8 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcd2Q99JR8 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcd2Q99JR8 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcd2Q99JR8 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcd2Q99JR8 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Smarcd2Q99JR8 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Smarcd2Q99JR8 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Smarcd2Q99JR8 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcd2Q99JR8 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcd2Q99JR8 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcd2Q99JR8 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcd2Q99JR8 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms