Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cdk9Q99J95 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Cdk9Q99J95 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdk9Q99J95 Gm22065-201ENSMUST00000103753 110 ntBASIC13.3□□□□□ -0.28
Cdk9Q99J95 Gm22066-201ENSMUST00000103761 110 ntBASIC13.3□□□□□ -0.28
Cdk9Q99J95 Gm24932-201ENSMUST00000103763 110 ntBASIC13.3□□□□□ -0.28
Cdk9Q99J95 Gm24115-201ENSMUST00000103799 110 ntBASIC13.3□□□□□ -0.28
Cdk9Q99J95 Gm22190-201ENSMUST00000103827 110 ntBASIC13.3□□□□□ -0.28
Cdk9Q99J95 Gm22191-201ENSMUST00000103831 110 ntBASIC13.3□□□□□ -0.28
Cdk9Q99J95 Gm24721-201ENSMUST00000103849 110 ntBASIC13.3□□□□□ -0.28
Cdk9Q99J95 Gm28018-201ENSMUST00000103869 110 ntBASIC13.3□□□□□ -0.28
Cdk9Q99J95 Gm26399-201ENSMUST00000103937 110 ntBASIC13.3□□□□□ -0.28
Cdk9Q99J95 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Cdk9Q99J95 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.3□□□□□ -0.28
Cdk9Q99J95 Gm5566-201ENSMUST00000116118 459 ntBASIC13.3□□□□□ -0.28
Cdk9Q99J95 Gm15920-201ENSMUST00000118998 402 ntBASIC13.3□□□□□ -0.28
Cdk9Q99J95 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.3□□□□□ -0.28
Cdk9Q99J95 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cdk9Q99J95 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.3□□□□□ -0.28
Cdk9Q99J95 Gm25349-201ENSMUST00000177728 110 ntBASIC13.3□□□□□ -0.28
Cdk9Q99J95 Gm23616-201ENSMUST00000177797 110 ntBASIC13.3□□□□□ -0.28
Cdk9Q99J95 Gm25871-201ENSMUST00000177816 110 ntBASIC13.3□□□□□ -0.28
Cdk9Q99J95 Gm24752-201ENSMUST00000178240 110 ntBASIC13.3□□□□□ -0.28
Cdk9Q99J95 Gm24496-201ENSMUST00000178287 110 ntBASIC13.3□□□□□ -0.28
Cdk9Q99J95 Gm25649-201ENSMUST00000178476 110 ntBASIC13.3□□□□□ -0.28
Cdk9Q99J95 Gm25548-201ENSMUST00000178681 110 ntBASIC13.3□□□□□ -0.28
Cdk9Q99J95 Gm23147-201ENSMUST00000178841 110 ntBASIC13.3□□□□□ -0.28
Cdk9Q99J95 Gm26095-201ENSMUST00000179270 110 ntBASIC13.3□□□□□ -0.28
Cdk9Q99J95 Gm22171-201ENSMUST00000179283 110 ntBASIC13.3□□□□□ -0.28
Cdk9Q99J95 Gm23936-201ENSMUST00000179354 110 ntBASIC13.3□□□□□ -0.28
Cdk9Q99J95 Gm22619-201ENSMUST00000179516 110 ntBASIC13.3□□□□□ -0.28
Cdk9Q99J95 Gm25255-201ENSMUST00000179579 110 ntBASIC13.3□□□□□ -0.28
Cdk9Q99J95 Gm24755-201ENSMUST00000179691 110 ntBASIC13.3□□□□□ -0.28
Cdk9Q99J95 Gm26506-201ENSMUST00000179692 110 ntBASIC13.3□□□□□ -0.28
Cdk9Q99J95 Gm25086-201ENSMUST00000179931 110 ntBASIC13.3□□□□□ -0.28
Cdk9Q99J95 Gm23243-201ENSMUST00000180047 110 ntBASIC13.3□□□□□ -0.28
Cdk9Q99J95 Gm24659-201ENSMUST00000180212 110 ntBASIC13.3□□□□□ -0.28
Cdk9Q99J95 Gm24169-201ENSMUST00000180244 110 ntBASIC13.3□□□□□ -0.28
Cdk9Q99J95 Gm23689-201ENSMUST00000180354 110 ntBASIC13.3□□□□□ -0.28
Cdk9Q99J95 Gm27359-201ENSMUST00000184153 110 ntBASIC13.3□□□□□ -0.28
Cdk9Q99J95 Gm27785-201ENSMUST00000184268 110 ntBASIC13.3□□□□□ -0.28
Cdk9Q99J95 Gm27466-201ENSMUST00000184396 110 ntBASIC13.3□□□□□ -0.28
Cdk9Q99J95 Gm27703-201ENSMUST00000184836 110 ntBASIC13.3□□□□□ -0.28
Cdk9Q99J95 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdk9Q99J95 Gm6916-202ENSMUST00000205523 195 ntBASIC13.3□□□□□ -0.28
Cdk9Q99J95 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdk9Q99J95 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.3□□□□□ -0.28
Cdk9Q99J95 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdk9Q99J95 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdk9Q99J95 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.3□□□□□ -0.28
Cdk9Q99J95 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdk9Q99J95 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdk9Q99J95 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdk9Q99J95 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cdk9Q99J95 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdk9Q99J95 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Cdk9Q99J95 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdk9Q99J95 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.3□□□□□ -0.28
Cdk9Q99J95 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cdk9Q99J95 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdk9Q99J95 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdk9Q99J95 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.3□□□□□ -0.28
Cdk9Q99J95 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Cdk9Q99J95 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC13.29□□□□□ -0.28
Cdk9Q99J95 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.29□□□□□ -0.28
Cdk9Q99J95 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdk9Q99J95 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdk9Q99J95 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.29□□□□□ -0.28
Cdk9Q99J95 Gm43051-201ENSMUST00000201096 2678 ntBASIC13.29□□□□□ -0.28
Cdk9Q99J95 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Cdk9Q99J95 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdk9Q99J95 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdk9Q99J95 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdk9Q99J95 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdk9Q99J95 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdk9Q99J95 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.29□□□□□ -0.28
Cdk9Q99J95 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cdk9Q99J95 Gm9719-201ENSMUST00000162765 543 ntBASIC13.29□□□□□ -0.28
Cdk9Q99J95 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cdk9Q99J95 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cdk9Q99J95 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdk9Q99J95 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdk9Q99J95 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdk9Q99J95 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Cdk9Q99J95 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdk9Q99J95 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdk9Q99J95 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdk9Q99J95 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdk9Q99J95 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdk9Q99J95 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdk9Q99J95 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cdk9Q99J95 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdk9Q99J95 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cdk9Q99J95 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdk9Q99J95 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cdk9Q99J95 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cdk9Q99J95 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdk9Q99J95 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdk9Q99J95 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdk9Q99J95 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 128.7 ms