Protein–RNA interactions for Protein: Q91Y14

Pcdha6, Pcdha6 protein, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha6Q91Y14 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdha6Q91Y14 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdha6Q91Y14 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.19□□□□□ -0.3
Pcdha6Q91Y14 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Pcdha6Q91Y14 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdha6Q91Y14 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdha6Q91Y14 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdha6Q91Y14 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdha6Q91Y14 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdha6Q91Y14 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.19□□□□□ -0.3
Pcdha6Q91Y14 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdha6Q91Y14 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha6Q91Y14 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha6Q91Y14 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha6Q91Y14 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Pcdha6Q91Y14 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.18□□□□□ -0.3
Pcdha6Q91Y14 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha6Q91Y14 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha6Q91Y14 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha6Q91Y14 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha6Q91Y14 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Pcdha6Q91Y14 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha6Q91Y14 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Pcdha6Q91Y14 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha6Q91Y14 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Pcdha6Q91Y14 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha6Q91Y14 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha6Q91Y14 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.18□□□□□ -0.3
Pcdha6Q91Y14 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha6Q91Y14 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.18□□□□□ -0.3
Pcdha6Q91Y14 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha6Q91Y14 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.18□□□□□ -0.3
Pcdha6Q91Y14 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.18□□□□□ -0.3
Pcdha6Q91Y14 Gm26315-201ENSMUST00000083890 321 ntBASIC13.18□□□□□ -0.3
Pcdha6Q91Y14 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.18□□□□□ -0.3
Pcdha6Q91Y14 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.18□□□□□ -0.3
Pcdha6Q91Y14 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha6Q91Y14 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha6Q91Y14 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha6Q91Y14 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha6Q91Y14 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Pcdha6Q91Y14 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Pcdha6Q91Y14 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha6Q91Y14 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha6Q91Y14 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Pcdha6Q91Y14 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha6Q91Y14 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha6Q91Y14 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha6Q91Y14 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.17□□□□□ -0.3
Pcdha6Q91Y14 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha6Q91Y14 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha6Q91Y14 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdha6Q91Y14 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha6Q91Y14 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Pcdha6Q91Y14 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha6Q91Y14 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha6Q91Y14 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha6Q91Y14 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Pcdha6Q91Y14 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha6Q91Y14 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha6Q91Y14 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.17□□□□□ -0.3
Pcdha6Q91Y14 Gm12341-201ENSMUST00000119724 503 ntBASIC13.17□□□□□ -0.3
Pcdha6Q91Y14 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdha6Q91Y14 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha6Q91Y14 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Pcdha6Q91Y14 Gm38223-201ENSMUST00000194484 695 ntBASIC13.17□□□□□ -0.3
Pcdha6Q91Y14 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha6Q91Y14 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.17□□□□□ -0.3
Pcdha6Q91Y14 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.17□□□□□ -0.3
Pcdha6Q91Y14 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha6Q91Y14 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha6Q91Y14 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha6Q91Y14 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Pcdha6Q91Y14 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha6Q91Y14 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha6Q91Y14 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.17□□□□□ -0.3
Pcdha6Q91Y14 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Pcdha6Q91Y14 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha6Q91Y14 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha6Q91Y14 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.17□□□□□ -0.3
Pcdha6Q91Y14 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdha6Q91Y14 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha6Q91Y14 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha6Q91Y14 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha6Q91Y14 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha6Q91Y14 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.17□□□□□ -0.3
Pcdha6Q91Y14 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha6Q91Y14 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdha6Q91Y14 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdha6Q91Y14 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdha6Q91Y14 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Pcdha6Q91Y14 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdha6Q91Y14 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdha6Q91Y14 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdha6Q91Y14 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdha6Q91Y14 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdha6Q91Y14 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdha6Q91Y14 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdha6Q91Y14 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdha6Q91Y14 Gm6447-201ENSMUST00000118905 835 ntBASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms