Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdha9Q91Y11 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdha9Q91Y11 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdha9Q91Y11 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdha9Q91Y11 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdha9Q91Y11 AC137842.1-201ENSMUST00000227896 2064 ntBASIC14.03□□□□□ -0.16
Pcdha9Q91Y11 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdha9Q91Y11 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdha9Q91Y11 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Pcdha9Q91Y11 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdha9Q91Y11 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Pcdha9Q91Y11 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.02□□□□□ -0.16
Pcdha9Q91Y11 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdha9Q91Y11 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdha9Q91Y11 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdha9Q91Y11 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdha9Q91Y11 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdha9Q91Y11 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdha9Q91Y11 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Pcdha9Q91Y11 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Pcdha9Q91Y11 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdha9Q91Y11 Gm9025-201ENSMUST00000122415 1575 ntBASIC14.02□□□□□ -0.16
Pcdha9Q91Y11 AC113060.1-201ENSMUST00000225689 1573 ntBASIC14.02□□□□□ -0.16
Pcdha9Q91Y11 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Pcdha9Q91Y11 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC14.02□□□□□ -0.16
Pcdha9Q91Y11 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdha9Q91Y11 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Pcdha9Q91Y11 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC14.02□□□□□ -0.17
Pcdha9Q91Y11 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdha9Q91Y11 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC14.02□□□□□ -0.17
Pcdha9Q91Y11 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdha9Q91Y11 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdha9Q91Y11 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Pcdha9Q91Y11 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdha9Q91Y11 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdha9Q91Y11 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdha9Q91Y11 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdha9Q91Y11 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdha9Q91Y11 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdha9Q91Y11 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdha9Q91Y11 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdha9Q91Y11 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdha9Q91Y11 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdha9Q91Y11 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdha9Q91Y11 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdha9Q91Y11 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Pcdha9Q91Y11 Gm45684-201ENSMUST00000210244 1571 ntBASIC14.01□□□□□ -0.17
Pcdha9Q91Y11 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdha9Q91Y11 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdha9Q91Y11 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC14.01□□□□□ -0.17
Pcdha9Q91Y11 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdha9Q91Y11 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdha9Q91Y11 Gm38049-201ENSMUST00000195698 1372 ntBASIC14.01□□□□□ -0.17
Pcdha9Q91Y11 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Pcdha9Q91Y11 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Pcdha9Q91Y11 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdha9Q91Y11 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC14.01□□□□□ -0.17
Pcdha9Q91Y11 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdha9Q91Y11 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdha9Q91Y11 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC14.01□□□□□ -0.17
Pcdha9Q91Y11 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC14.01□□□□□ -0.17
Pcdha9Q91Y11 Gm7561-201ENSMUST00000211203 886 ntBASIC14.01□□□□□ -0.17
Pcdha9Q91Y11 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC14.01□□□□□ -0.17
Pcdha9Q91Y11 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Pcdha9Q91Y11 AC155237.1-201ENSMUST00000226196 1279 ntBASIC14.01□□□□□ -0.17
Pcdha9Q91Y11 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdha9Q91Y11 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdha9Q91Y11 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Pcdha9Q91Y11 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC14.01□□□□□ -0.17
Pcdha9Q91Y11 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC14.01□□□□□ -0.17
Pcdha9Q91Y11 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdha9Q91Y11 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdha9Q91Y11 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdha9Q91Y11 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdha9Q91Y11 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdha9Q91Y11 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC14.01□□□□□ -0.17
Pcdha9Q91Y11 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdha9Q91Y11 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdha9Q91Y11 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdha9Q91Y11 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdha9Q91Y11 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Pcdha9Q91Y11 AC101945.2-201ENSMUST00000227886 1377 ntBASIC14□□□□□ -0.17
Pcdha9Q91Y11 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdha9Q91Y11 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC14□□□□□ -0.17
Pcdha9Q91Y11 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdha9Q91Y11 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC14□□□□□ -0.17
Pcdha9Q91Y11 Gm12203-201ENSMUST00000118235 598 ntBASIC14□□□□□ -0.17
Pcdha9Q91Y11 Gm12209-201ENSMUST00000120089 596 ntBASIC14□□□□□ -0.17
Pcdha9Q91Y11 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC14□□□□□ -0.17
Pcdha9Q91Y11 Gm22331-201ENSMUST00000158066 136 ntBASIC14□□□□□ -0.17
Pcdha9Q91Y11 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC14□□□□□ -0.17
Pcdha9Q91Y11 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC14□□□□□ -0.17
Pcdha9Q91Y11 Gm38297-201ENSMUST00000195122 1057 ntBASIC14□□□□□ -0.17
Pcdha9Q91Y11 Gm37497-201ENSMUST00000195830 798 ntBASIC14□□□□□ -0.17
Pcdha9Q91Y11 Gm6458-201ENSMUST00000211573 635 ntBASIC14□□□□□ -0.17
Pcdha9Q91Y11 Gm2824-203ENSMUST00000226189 1228 ntBASIC14□□□□□ -0.17
Pcdha9Q91Y11 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdha9Q91Y11 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdha9Q91Y11 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdha9Q91Y11 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms