Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Olfr1231-201ENSMUST00000099786 942 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Pcdhb20Q91XZ9 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb20Q91XZ9 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb20Q91XZ9 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb20Q91XZ9 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb20Q91XZ9 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.2□□□□□ -0.3
Pcdhb20Q91XZ9 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb20Q91XZ9 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb20Q91XZ9 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb20Q91XZ9 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Pcdhb20Q91XZ9 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.2□□□□□ -0.3
Pcdhb20Q91XZ9 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Pcdhb20Q91XZ9 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb20Q91XZ9 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb20Q91XZ9 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb20Q91XZ9 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb20Q91XZ9 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC13.2□□□□□ -0.3
Pcdhb20Q91XZ9 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb20Q91XZ9 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.19□□□□□ -0.3
Pcdhb20Q91XZ9 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb20Q91XZ9 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb20Q91XZ9 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb20Q91XZ9 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb20Q91XZ9 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb20Q91XZ9 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Pcdhb20Q91XZ9 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb20Q91XZ9 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb20Q91XZ9 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.19□□□□□ -0.3
Pcdhb20Q91XZ9 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb20Q91XZ9 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb20Q91XZ9 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Pcdhb20Q91XZ9 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb20Q91XZ9 Gm11485-201ENSMUST00000120048 1175 ntBASIC13.19□□□□□ -0.3
Pcdhb20Q91XZ9 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC13.19□□□□□ -0.3
Pcdhb20Q91XZ9 Gm26832-201ENSMUST00000181456 1282 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb20Q91XZ9 Mir7654-201ENSMUST00000185082 70 ntBASIC13.19□□□□□ -0.3
Pcdhb20Q91XZ9 Gm36974-201ENSMUST00000194200 1071 ntBASIC13.19□□□□□ -0.3
Pcdhb20Q91XZ9 Gm21461-201ENSMUST00000200382 863 ntBASIC13.19□□□□□ -0.3
Pcdhb20Q91XZ9 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.19□□□□□ -0.3
Pcdhb20Q91XZ9 AC163651.2-202ENSMUST00000222628 1192 ntTSL 5 BASIC13.19□□□□□ -0.3
Pcdhb20Q91XZ9 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb20Q91XZ9 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb20Q91XZ9 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Pcdhb20Q91XZ9 Gm26437-201ENSMUST00000082595 105 ntBASIC13.19□□□□□ -0.3
Pcdhb20Q91XZ9 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb20Q91XZ9 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb20Q91XZ9 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb20Q91XZ9 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb20Q91XZ9 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb20Q91XZ9 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Pcdhb20Q91XZ9 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb20Q91XZ9 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb20Q91XZ9 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb20Q91XZ9 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb20Q91XZ9 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb20Q91XZ9 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb20Q91XZ9 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb20Q91XZ9 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb20Q91XZ9 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Pcdhb20Q91XZ9 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb20Q91XZ9 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb20Q91XZ9 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.19□□□□□ -0.3
Pcdhb20Q91XZ9 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb20Q91XZ9 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb20Q91XZ9 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb20Q91XZ9 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb20Q91XZ9 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb20Q91XZ9 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb20Q91XZ9 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Pcdhb20Q91XZ9 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb20Q91XZ9 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb20Q91XZ9 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb20Q91XZ9 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb20Q91XZ9 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Pcdhb20Q91XZ9 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb20Q91XZ9 Smgc-204ENSMUST00000109277 855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb20Q91XZ9 Gm13732-201ENSMUST00000117753 535 ntBASIC13.18□□□□□ -0.3
Pcdhb20Q91XZ9 1110059G10Rik-202ENSMUST00000118422 723 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb20Q91XZ9 Mrps36-ps2-201ENSMUST00000118658 309 ntBASIC13.18□□□□□ -0.3
Pcdhb20Q91XZ9 Gm8051-201ENSMUST00000120464 466 ntBASIC13.18□□□□□ -0.3
Pcdhb20Q91XZ9 Gm11918-201ENSMUST00000121660 179 ntBASIC13.18□□□□□ -0.3
Pcdhb20Q91XZ9 Gm14617-201ENSMUST00000128053 798 ntTSL 5 BASIC13.18□□□□□ -0.3
Pcdhb20Q91XZ9 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb20Q91XZ9 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.18□□□□□ -0.3
Pcdhb20Q91XZ9 Olfr1025-ps1-201ENSMUST00000188749 921 ntBASIC13.18□□□□□ -0.3
Pcdhb20Q91XZ9 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb20Q91XZ9 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC13.18□□□□□ -0.3
Pcdhb20Q91XZ9 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb20Q91XZ9 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC13.18□□□□□ -0.3
Pcdhb20Q91XZ9 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb20Q91XZ9 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb20Q91XZ9 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC13.18□□□□□ -0.3
Pcdhb20Q91XZ9 AC153897.1-201ENSMUST00000213510 470 ntTSL 3 BASIC13.18□□□□□ -0.3
Pcdhb20Q91XZ9 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Pcdhb20Q91XZ9 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.18□□□□□ -0.3
Pcdhb20Q91XZ9 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb20Q91XZ9 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Pcdhb20Q91XZ9 Vmn1r216-201ENSMUST00000080253 1059 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Pcdhb20Q91XZ9 Olfr1474-201ENSMUST00000096202 945 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Pcdhb20Q91XZ9 Olfr201-201ENSMUST00000099656 927 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms