Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb3Q91XZ7 Gm27618-201ENSMUST00000183671 60 ntBASIC13.31□□□□□ -0.28
Pcdhb3Q91XZ7 Gm29541-201ENSMUST00000191351 678 ntBASIC13.31□□□□□ -0.28
Pcdhb3Q91XZ7 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Pcdhb3Q91XZ7 Gm44785-201ENSMUST00000207379 620 ntTSL 5 BASIC13.31□□□□□ -0.28
Pcdhb3Q91XZ7 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Pcdhb3Q91XZ7 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb3Q91XZ7 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.31□□□□□ -0.28
Pcdhb3Q91XZ7 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb3Q91XZ7 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Pcdhb3Q91XZ7 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb3Q91XZ7 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb3Q91XZ7 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb3Q91XZ7 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb3Q91XZ7 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb3Q91XZ7 Gm13615-201ENSMUST00000120242 1612 ntBASIC13.31□□□□□ -0.28
Pcdhb3Q91XZ7 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Pcdhb3Q91XZ7 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb3Q91XZ7 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb3Q91XZ7 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.31□□□□□ -0.28
Pcdhb3Q91XZ7 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb3Q91XZ7 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb3Q91XZ7 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb3Q91XZ7 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb3Q91XZ7 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.3□□□□□ -0.28
Pcdhb3Q91XZ7 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Pcdhb3Q91XZ7 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb3Q91XZ7 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb3Q91XZ7 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb3Q91XZ7 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb3Q91XZ7 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb3Q91XZ7 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb3Q91XZ7 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb3Q91XZ7 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb3Q91XZ7 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb3Q91XZ7 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb3Q91XZ7 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.3□□□□□ -0.28
Pcdhb3Q91XZ7 Gm25144-201ENSMUST00000179561 110 ntBASIC13.3□□□□□ -0.28
Pcdhb3Q91XZ7 Gm25352-201ENSMUST00000179815 110 ntBASIC13.3□□□□□ -0.28
Pcdhb3Q91XZ7 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.3□□□□□ -0.28
Pcdhb3Q91XZ7 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.3□□□□□ -0.28
Pcdhb3Q91XZ7 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.3□□□□□ -0.28
Pcdhb3Q91XZ7 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb3Q91XZ7 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.3□□□□□ -0.28
Pcdhb3Q91XZ7 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.3□□□□□ -0.28
Pcdhb3Q91XZ7 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb3Q91XZ7 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb3Q91XZ7 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Pcdhb3Q91XZ7 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.3□□□□□ -0.28
Pcdhb3Q91XZ7 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb3Q91XZ7 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb3Q91XZ7 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb3Q91XZ7 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb3Q91XZ7 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb3Q91XZ7 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb3Q91XZ7 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Pcdhb3Q91XZ7 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb3Q91XZ7 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb3Q91XZ7 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb3Q91XZ7 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb3Q91XZ7 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb3Q91XZ7 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb3Q91XZ7 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC13.29□□□□□ -0.28
Pcdhb3Q91XZ7 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.29□□□□□ -0.28
Pcdhb3Q91XZ7 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb3Q91XZ7 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb3Q91XZ7 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb3Q91XZ7 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb3Q91XZ7 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.29□□□□□ -0.28
Pcdhb3Q91XZ7 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Pcdhb3Q91XZ7 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.29□□□□□ -0.28
Pcdhb3Q91XZ7 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.29□□□□□ -0.28
Pcdhb3Q91XZ7 Gm27321-201ENSMUST00000185021 205 ntBASIC13.29□□□□□ -0.28
Pcdhb3Q91XZ7 Gm29107-201ENSMUST00000190910 347 ntBASIC13.29□□□□□ -0.28
Pcdhb3Q91XZ7 Gm40332-201ENSMUST00000199847 938 ntBASIC13.29□□□□□ -0.28
Pcdhb3Q91XZ7 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Pcdhb3Q91XZ7 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb3Q91XZ7 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb3Q91XZ7 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
Pcdhb3Q91XZ7 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb3Q91XZ7 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb3Q91XZ7 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb3Q91XZ7 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.29□□□□□ -0.28
Pcdhb3Q91XZ7 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Pcdhb3Q91XZ7 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb3Q91XZ7 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb3Q91XZ7 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Pcdhb3Q91XZ7 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb3Q91XZ7 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Pcdhb3Q91XZ7 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb3Q91XZ7 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb3Q91XZ7 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.28□□□□□ -0.28
Pcdhb3Q91XZ7 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Pcdhb3Q91XZ7 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Pcdhb3Q91XZ7 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Pcdhb3Q91XZ7 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb3Q91XZ7 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.28□□□□□ -0.28
Pcdhb3Q91XZ7 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb3Q91XZ7 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Pcdhb3Q91XZ7 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms