Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb8Q91XZ2 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb8Q91XZ2 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Pcdhb8Q91XZ2 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb8Q91XZ2 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Pcdhb8Q91XZ2 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb8Q91XZ2 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb8Q91XZ2 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb8Q91XZ2 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Pcdhb8Q91XZ2 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.92□□□□□ -0.34
Pcdhb8Q91XZ2 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb8Q91XZ2 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb8Q91XZ2 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb8Q91XZ2 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb8Q91XZ2 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb8Q91XZ2 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb8Q91XZ2 Gm28631-201ENSMUST00000190740 334 ntBASIC12.92□□□□□ -0.34
Pcdhb8Q91XZ2 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb8Q91XZ2 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb8Q91XZ2 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb8Q91XZ2 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Pcdhb8Q91XZ2 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb8Q91XZ2 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb8Q91XZ2 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb8Q91XZ2 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb8Q91XZ2 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.92□□□□□ -0.34
Pcdhb8Q91XZ2 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb8Q91XZ2 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
Pcdhb8Q91XZ2 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb8Q91XZ2 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb8Q91XZ2 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb8Q91XZ2 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb8Q91XZ2 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb8Q91XZ2 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb8Q91XZ2 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb8Q91XZ2 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb8Q91XZ2 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb8Q91XZ2 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb8Q91XZ2 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb8Q91XZ2 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb8Q91XZ2 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb8Q91XZ2 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Pcdhb8Q91XZ2 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb8Q91XZ2 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.91□□□□□ -0.34
Pcdhb8Q91XZ2 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb8Q91XZ2 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Pcdhb8Q91XZ2 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb8Q91XZ2 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb8Q91XZ2 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb8Q91XZ2 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb8Q91XZ2 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb8Q91XZ2 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb8Q91XZ2 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb8Q91XZ2 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.91□□□□□ -0.34
Pcdhb8Q91XZ2 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb8Q91XZ2 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb8Q91XZ2 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.91□□□□□ -0.34
Pcdhb8Q91XZ2 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.91□□□□□ -0.34
Pcdhb8Q91XZ2 Mir6977-201ENSMUST00000184960 64 ntBASIC12.91□□□□□ -0.34
Pcdhb8Q91XZ2 Gm10576-201ENSMUST00000191927 825 ntBASIC12.91□□□□□ -0.34
Pcdhb8Q91XZ2 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.91□□□□□ -0.34
Pcdhb8Q91XZ2 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.91□□□□□ -0.34
Pcdhb8Q91XZ2 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb8Q91XZ2 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb8Q91XZ2 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb8Q91XZ2 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Pcdhb8Q91XZ2 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb8Q91XZ2 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb8Q91XZ2 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb8Q91XZ2 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb8Q91XZ2 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb8Q91XZ2 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb8Q91XZ2 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb8Q91XZ2 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Pcdhb8Q91XZ2 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb8Q91XZ2 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb8Q91XZ2 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb8Q91XZ2 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb8Q91XZ2 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb8Q91XZ2 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb8Q91XZ2 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Pcdhb8Q91XZ2 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb8Q91XZ2 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
Pcdhb8Q91XZ2 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb8Q91XZ2 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb8Q91XZ2 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb8Q91XZ2 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.9□□□□□ -0.34
Pcdhb8Q91XZ2 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Pcdhb8Q91XZ2 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb8Q91XZ2 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.9□□□□□ -0.34
Pcdhb8Q91XZ2 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb8Q91XZ2 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb8Q91XZ2 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb8Q91XZ2 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb8Q91XZ2 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb8Q91XZ2 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb8Q91XZ2 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb8Q91XZ2 Gm13689-201ENSMUST00000119360 685 ntBASIC12.9□□□□□ -0.34
Pcdhb8Q91XZ2 Gm12341-201ENSMUST00000119724 503 ntBASIC12.9□□□□□ -0.34
Pcdhb8Q91XZ2 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 99.5 ms